Entomomonas asaccharolytica: JHT90_03245
Help
Entry
JHT90_03245 CDS
T08664
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
eaz
Entomomonas asaccharolytica
Brite
KEGG Orthology (KO) [BR:
eaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eaz03009
]
JHT90_03245 (rlmD)
Enzymes [BR:
eaz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JHT90_03245 (rlmD)
Ribosome biogenesis [BR:
eaz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JHT90_03245 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RrnaAD
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
Methyltransf_15
PCMT
TRAM
Methyltr_RsmB-F
Methyltransf_11
PrmA
Methyltransf_23
DOT1
Methyltransf_12
BpsA_C
Methyltransf_4
Ubie_methyltran
FtsJ
TPMT
Motif
Other DBs
NCBI-ProteinID:
QQP86272
UniProt:
A0A974RXK6
LinkDB
All DBs
Position
complement(725048..726406)
Genome browser
AA seq
452 aa
AA seq
DB search
MSKQNQGLRFQSNRKPSNSKTIPVGKKQTLTIDRLSHDGRGITTLHNKTWFVAGALPSEQ
VNVRVVSSQSKWVNAKCEQVITLSAIRQTPPCQYAGICGGCELQHISYEQQIQFKQNTVI
EQLQRIANITLQDWQAPLINKPFAYRRRARIATRFNEQTKQLEIGFRAAFSQQIVAINNC
LVLTESLNQLLQQLPDCLTQLTAPRHIGHIELFSGNQYALLVRHTAPLTDKDINTLHTFC
QTQQCQLWLQGKAFPMPYQTDLSLSYHLIANQQSLKLNYRMGDFIQVNAEINQAMVQQAL
DWLQIQANESVLDLFCGLGNFTLPLAKQAKQVIAVEAVEGMVDLAKENAKQNNIDNALFY
KADLTQPIAGQIWAQEKFAAVLLDPPRDGAMEIIKQMKKLDTNRLLYVSCNPATLARDAK
LLIEQGYQIKKAGIIDMFPQTSHCEVMVLFER
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaaaccaaggtttgcgctttcaaagcaaccgtaaaccaagcaatagtaag
actattcctgtaggtaaaaaacaaaccttaaccattgaccgactctctcatgatgggcgg
ggtattactaccttgcacaataaaacatggtttgtagcaggtgccctaccctctgaacaa
gtgaatgtaagggtagtttcaagccaaagcaaatgggtaaatgctaaatgtgagcaagta
attaccctttcagctatacgtcaaactcccccatgccaatatgcaggaatttgtggaggt
tgtgagttacaacatatttcctacgaacaacaaatacagttcaaacaaaatactgttatt
gagcaattgcaacgaatagcgaatattacattacaagattggcaagcacctttaattaat
aaaccttttgcttatcgtcgtcgagcgcgcattgccactcgctttaacgaacaaactaaa
caattagaaataggctttagggcggcttttagtcaacaaatcgttgctattaacaattgt
ctggtattaactgaatcgcttaaccagttattacaacaattacctgattgtttaacgcaa
ctaacagcacctcgtcatattggccatatagaattattttctggcaatcagtatgctcta
ctggttcgccatacagcaccactaactgataaagatattaatacgctacatactttttgc
caaacccaacaatgccaattatggttgcagggtaaagctttccctatgccttaccaaact
gatttatctttaagctaccacttaatagctaatcaacagtcccttaaactaaactatcgt
atgggagactttatacaggtaaatgctgaaattaatcaggccatggtgcaacaagcatta
gattggctacaaatacaagctaacgaatcagtattagatcttttttgtggattgggtaac
ttcacccttccattagcaaaacaagctaagcaggtaattgctgttgaagctgttgaagga
atggtagatttagctaaagaaaatgccaaacaaaacaatatcgacaatgccttattctat
aaagctgatcttacacaacctattgctggccaaatatgggctcaagagaagtttgctgct
gtattattagatccacccagagatggagcaatggaaataataaaacagatgaaaaaatta
gatacaaatcgtttactctatgtttcttgtaatccagccaccttagcaagggacgccaaa
ctattgatagaacaaggttatcaaattaaaaaagcaggtataatagatatgtttccacaa
acctcacattgtgaagtcatggtattgtttgagcgataa
DBGET
integrated database retrieval system
