Entomomonas asaccharolytica: JHT90_05230
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Entry
JHT90_05230 CDS
T08664
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eaz
Entomomonas asaccharolytica
Brite
KEGG Orthology (KO) [BR:
eaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaz03032
]
JHT90_05230 (topA)
03400 DNA repair and recombination proteins [BR:
eaz03400
]
JHT90_05230 (topA)
Enzymes [BR:
eaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JHT90_05230 (topA)
DNA replication proteins [BR:
eaz03032
]
Prokaryotic type
DNA Topoisomerases
JHT90_05230 (topA)
DNA repair and recombination proteins [BR:
eaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JHT90_05230 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Ribosomal_L10
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QQP86643
UniProt:
A0A974RXV6
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Position
1156396..1159005
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTGTTKATSTAKGKKVADSTLSP
KERAKQQLFKRMGVDPEHGWKAHYEILPGKEKVVDELKKLAKEADTIYLATDLDREGEAI
AWHLREAIGGDDSRYKRVVFNEITQKAIQSAFAEPGELDLNRVNAQQARRFLDRVVGFMV
SPLLWQKIARGLSAGRVQSVAVRLIVEREREIRAFVPEEFWQIAADLATAKKENINFDVV
KQHGQAFRPVNKEQTDKALQLLEKAAYKVVKREDKPTISKPSAPFITSTLQQAASTRLGF
SVKKTMMMAQRLYEAGYITYMRTDSTNLSADAIDMVRGYIDSEFGKKYLPAKAITYSSKN
NAQEAHEAIRPSDVNLRATQLSAMERDAERLYELIWCQFVACQMPPAEYLSTTVTVEAGD
FELKAKGRILKFDGYTKVLAAVSKTAEDQVLPVVNEGEILDLIKLNPSQHFTKPAPRYSE
ASLVKELEKRGIGRPSTYASIISTIQERGYVTLNNRRFYAEKMGDIVTERLTESFNDLMD
YNFTAHMEENLDQIAEGDMPWKKLLDSFYKGFSQKLAKAEQTDEGMRANTPTLTPLIKCK
ECGRDMMIRTASTGVFLGCSGYNLPPKERCKATINLIPGDEIAQDDEGESEARVLHNKHR
CTKCGTAMDAYLMDEHHKLHICGNNPDCDGYQIEEGTFKIKGYEGPVLECDRCGSEMQLK
TGRFGKFFACTNEDCKNTRKLLANGQPAPPKMDAVPMPELKCEKVDDTYVLRDGASGLFL
AASQFPRKRETRAPLVKELIPHKAEIDPKYHYLCDAPIKDPDGNFSIIRFSRKTKEQYVQ
TEVNGKPTGWKAFYDGKKWLVTDKTTPKK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcactggtcattgtagaatctccagctaaggctaaaacgattaataaatat
ttaggcaatcaatatgttgtaaaatcaagtattggtcatattcgtgatttgcctacagga
actactaaagcgacctcaacagcgaaaggtaagaaagtagcagatagtactttatcgcct
aaagaacgagccaagcaacaactattcaagcgtatgggagtagatccagaacatggttgg
aaagctcattatgagattctacctggcaaagagaaggtagtagatgagttaaaaaaatta
gccaaggaggctgatactatctacctagcaaccgacttggatagagaaggagaagcaatt
gcatggcatttaagagaagccattggtggagatgatagccgttataagcgagtagttttt
aatgagattacccaaaaagcaattcagagtgcctttgctgaaccaggtgaattagatctt
aaccgtgtaaatgcgcaacaagcacgtcgttttctagatcgcgtggttggttttatggtt
tcgccattattgtggcaaaaaatcgctcgaggtttatctgcggggcgagtccaatcagta
gctgtgcgcttaattgttgaacgagaaagagaaattcgtgcttttgttccagaagagttc
tggcaaattgcagctgatttggcaacggctaaaaaagaaaatatcaattttgatgttgtt
aagcagcatggccaagcatttcgtcctgttaataaagagcaaactgataaagctttacaa
cttttagaaaaagcagcgtataaagttgttaaacgtgaagataagcctaccattagtaag
ccatcagcaccttttattacttctactttacagcaagcggctagtactcgtttaggtttt
tcggttaagaaaacaatgatgatggcgcaacgcttatatgaagcaggttatattacctat
atgcgtactgattcaactaacttatctgcagatgctatagatatggtgcgtggctatata
gatagtgagtttggtaaaaaatatttacctgctaaggccattacctattctagtaaaaat
aatgcacaagaggcacatgaggctattcgtccttctgatgttaatttaagagctactcaa
ttatcagcaatggagcgagatgctgaacgtttatatgagttaatctggtgccagtttgta
gcttgtcaaatgccacctgctgaatatttatccacaacagttactgttgaagcaggtgat
tttgaattaaaagccaaaggccgtattctgaaatttgatggttatacaaaagtgcttgct
gctgtgagtaaaacagcagaagatcaagtattacctgtggttaatgaaggtgaaatatta
gatttaattaaacttaatccttcacagcactttactaaacctgcacctcgttattcagaa
gcaagcttagtaaaagaattggaaaagcgtggaattggtcgtccttctacttatgcttcc
attatttccactattcaagagcgtggttatgttactttaaataatcgtcgtttttatgca
gaaaagatgggcgatattgttactgagcgattaacggaaagttttaatgatttaatggat
tataactttacggcccatatggaagaaaatcttgaccagattgccgaaggtgatatgcct
tggaaaaaactattggatagtttttataaaggatttagtcaaaaattagcaaaggcagag
cagactgatgaaggcatgcgtgccaatacacctaccttaacacctttaattaaatgtaaa
gaatgcggtcgagatatgatgatccgtaccgcttcaacaggtgtgtttttaggttgttct
ggttataaccttccacctaaggagcgttgtaaagcaaccattaatttgattcctggtgat
gaaattgcacaggatgatgagggcgagtcagaagctcgtgtattacataataaacatcgc
tgtactaaatgtggtactgcaatggatgcttatctaatggatgagcatcataaactgcat
atttgtggcaataatcctgattgtgatggttatcagattgaagagggtacctttaagatt
aaaggctatgaagggcctgtattagaatgtgatcgctgcggtagtgaaatgcagttaaaa
acagggcgtttcggaaaattctttgcatgtaccaatgaggactgtaaaaatactcgtaag
ttattggcaaatggccaacctgcaccaccgaaaatggatgcagtacctatgcctgaactt
aagtgtgaaaaagtggatgatacttatgtgttacgtgatggtgcctcaggattattttta
gcggctagtcaatttcctagaaaacgtgaaacaagagcgcctctcgttaaagaattgatt
cctcacaaagcagagattgatcctaaataccattatctttgtgatgcacctatcaaagat
ccagatgggaattttagtataatccgttttagtagaaagactaaagagcaatatgtacaa
acagaagtaaatggcaagccaacgggttggaaagccttttatgatggtaaaaagtggcta
gtaactgataaaaccacaccgaaaaagtaa
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