Entomomonas asaccharolytica: JHT90_05585
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Entry
JHT90_05585 CDS
T08664
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
eaz
Entomomonas asaccharolytica
Pathway
eaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHT90_05585 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaz03019
]
JHT90_05585 (rhlB)
Enzymes [BR:
eaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JHT90_05585 (rhlB)
Messenger RNA biogenesis [BR:
eaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JHT90_05585 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QQP86710
UniProt:
A0A974NHI6
LinkDB
All DBs
Position
complement(1231508..1232905)
Genome browser
AA seq
465 aa
AA seq
DB search
MLKALKNFFTKKQATTPQQVVNKAPSENASQQNNKHKKTPYKKPRVKKQQSANKKLAKTP
ITDWQLEDFIVAPQAGKTRFHDLFLSNSLMHAIHDLGFTYCTPIQAGVLGHTLKGLDCIG
QAQTGTGKTAAFLISIIAQLEETPPPTERYMGEPRALIIAPTRELVIQIAKEAQTLTKYT
SLNVMSFVGGMDFNKQLRQIENNYCDILVATPGRLLDFQQRNEIHLDMLEILVLDEADRM
LDMGFIPQVRQIIRHTPHKRDRQTLFFSATFTDDVMDLAKQWTTDPAIVEITPETVASDT
IEQHIYAVSETDKLTLLYNLIQQNNWQRVIVFANRRDQVRDIEKQLKYQGISTALLSGEV
AQNKRVQTLEKFRSGKIAVLIATDVAGRGIHIDGISHVINYNLPETPDDYVHRIGRTGRA
GTKGISISLIGEDDIFILPNIEALLGQKLEGKIPPANLLTPLPKK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaaagctttaaagaatttttttactaaaaaacaagctactactcctcaacaagtg
gttaataaagctccatctgaaaacgcttcgcaacaaaataataaacacaaaaaaacacct
tataaaaagcctcgtgttaaaaagcagcaatcagcaaacaagaaattagcaaaaacacct
atcaccgactggcaattagaagattttattgtagcaccacaagctggtaaaacacgcttc
catgatttatttttatcaaattctctaatgcatgctatacatgatcttggttttacctat
tgcacccctattcaagcaggtgtactaggccataccttaaaagggctagattgcattgga
caagcacaaactggcacaggaaaaacagcagcttttcttatttctattattgcccaatta
gaagagacgccaccacccactgaacgctacatgggcgaacctagagcgttaatcattgcc
cctactcgagaattggttatacaaatcgctaaagaagcacaaacattaaccaaatacact
tctcttaatgtcatgagttttgtgggtggcatggactttaacaagcaattgcggcaaata
gagaacaattattgtgatattttggtagcgacacctggtcgtttattagattttcagcaa
cgtaatgaaattcatttagatatgctagaaatacttgttcttgatgaagctgatcggatg
ttagatatgggttttatcccacaagttagacaaattattcgccatactccccataaacgc
gatagacaaactctatttttctctgccacctttactgatgatgtaatggatttagcaaag
caatggactacagatccagcgattgtagaaataacgccagaaaccgttgctagcgatact
attgagcaacatatatatgctgtatcagaaacagataaactgactttactctataatcta
atacagcaaaataattggcaacgggttattgtttttgctaatcgacgtgaccaagtacga
gatatcgaaaagcaattgaaatatcaaggcattagcactgctctattatcaggggaagtg
gctcagaataaacgtgtacaaacgttagaaaaattccgctcaggtaaaattgctgtatta
attgctactgatgtagcaggtcggggtatccatattgatggtatcagccatgttatcaac
tataatttaccagaaactcctgatgattatgtgcatcgtataggccgtactggtcgtgca
ggaactaaaggtatttctattagtctaatcggagaagatgatatttttatattacctaat
attgaggctttattaggtcaaaaattagaaggaaaaattccccctgctaatttattaaca
ccattacccaaaaaataa
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