Entomomonas asaccharolytica: JHT90_11010
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Entry
JHT90_11010 CDS
T08664
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eaz
Entomomonas asaccharolytica
Brite
KEGG Orthology (KO) [BR:
eaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eaz03016
]
JHT90_11010 (rnd)
Enzymes [BR:
eaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JHT90_11010 (rnd)
Transfer RNA biogenesis [BR:
eaz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JHT90_11010 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QQP87197
UniProt:
A0A974NIU1
LinkDB
All DBs
Position
complement(2373255..2374388)
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AA seq
377 aa
AA seq
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MSEEDLVLFNVVWIRDNKTLVEYCSQWQQLPFITLDTEFLRETTFYPIAGLIQLSDGKIP
YLIDPLAISDWSAFAQLLENKQVIKVLHACSEDLELLFQLTGVITEPVFDTQVAAAFLGM
GITLGYSPLVNQLLNKEISKQEKRSDWLQRPLSAEQEQYAAADVMYLIELYHYFISQLSA
EKLQWLYEDTKELAESYAKVPDFQTLYKESRQAWRLSRQQLAVLKALYAWREEQARTQNI
ARGRLLKDNSLLMMAKYQPNNLVALAKTPELHPRTLRKEGDALLAVIEKAAKIDQQDWPQ
RIDRPLSVNSGKLAKELKKLVQHKATELDICPELLWRKRIIEKILYSVQASKDYQLPDSL
KGWRKEILSDILIQALN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggaggatttagtgctatttaatgttgtgtggattcgcgataataaaaccttg
gttgagtattgtagtcaatggcaacaactaccctttattacgttagatactgaattctta
agagaaacaaccttttatcctatagcaggtttgatacagcttagtgatggaaaaatacct
tatttaatagatcctcttgctatttctgattggtctgcatttgcccaattactagagaac
aaacaagtcataaaagtattacatgcctgttcagaagatttagagttattattccaactc
acaggtgttattactgaacctgtttttgatacccaagtggctgctgcatttttgggtatg
ggcatcacattaggttactcgccgttagttaatcaattattgaataaagaaataagtaag
caagaaaaacgctcagattggttacaacgtcctttatcagcagagcaagagcaatatgca
gcagcagatgtgatgtatttaatagagctgtaccattattttattagtcagttatctgct
gaaaaattacagtggctttatgaggacactaaagaactcgctgaaagctatgctaaggta
cctgactttcaaacattatataaagaatcaagacaagcttggcgtttatcaaggcaacag
ttggcggtgttaaaagcgctttatgcttggcgagaagagcaagcaagaacacaaaatatt
gccagaggtcgattgttaaaagacaatagtttgttaatgatggctaagtaccagcctaat
aatttagtcgcactagcaaaaacacctgaattacatcctagaactttgcgtaaagagggc
gatgcgcttttagcagtcattgaaaaagccgctaagattgatcaacaagattggccacaa
cgaatagataggccgttatcagtgaatagtggcaagcttgctaaagagttaaaaaagcta
gtacagcataaagctaccgagttagacatttgtcctgagttattatggcgcaaaaggata
attgaaaaaatattatattcagttcaagctagtaaagattatcagttgcctgatagttta
aaaggttggcgtaaagaaatattatctgacattttaatacaagcattaaattaa
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