Entomomonas asaccharolytica: JHT90_12895
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Entry
JHT90_12895 CDS
T08664
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eaz
Entomomonas asaccharolytica
Pathway
eaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHT90_12895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaz03019
]
JHT90_12895
03009 Ribosome biogenesis [BR:
eaz03009
]
JHT90_12895
Enzymes [BR:
eaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JHT90_12895
Messenger RNA biogenesis [BR:
eaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JHT90_12895
Ribosome biogenesis [BR:
eaz03009
]
Prokaryotic type
rRNA helicases
JHT90_12895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
UTP25_NTPase-like
AAA_22
HEM4
AAA_19
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QQP85266
UniProt:
A0A974RWI7
LinkDB
All DBs
Position
2771547..2773346
Genome browser
AA seq
599 aa
AA seq
DB search
MTQKKNSSFAELGIHPSILAAIAAVGYEEPSPIQAKAIPEILAGHDIIGQAQTGTGKTAA
FALPILSKIDPTSRHTQVLVLAPTRELALQVADAFESYAKQMPTVKVAAIYGGAPMGAQL
KAIRNGVQVLVATPGRLCDHLRRDANFLSGVQFLVLDEADEMLKLGFMDDLESIFKTLPK
KRQTALFSATLPASIKAIAEKQLNEPKNIKIAAKTQTVERIEQTYLMVHPDQKNAAVLRL
LEVEDFDALIAFVRTKQATLDLATELEIKGYRVAALNGDIAQNQREKVIESLKDGRLDIV
VATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRTGKALLLVTPRERRMLQT
IERVTKQEVSEATLPNSQSILEARIRRLTKNLQPFTKPEESQQHYVELVNKLTTDLDCSV
EDLAVALLRRATNRRPLTVEEIERTEPKLTPISNAKREPGSRDRKERGERRERGERKERG
ERGERRERGERKERGERSERGPRIEREGRSSGRSNDRVSEGKVRCRTPVGSLDGVAAKNL
LGAILNEAGINKDQIGKITIRDSFSIVELPEKGLEKILTKLKDTRVAGKPLKLRRYRED
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaaaaaaaacagctcatttgctgagcttggtattcaccctagtattttagcg
gctattgctgcggttggttacgaagaaccatctcctattcaagcaaaagcaattccagaa
attctagctggccacgatattattggccaagcacaaacaggtacaggtaaaacagctgct
tttgcgttacctattttaagtaaaattgatcccactagccgccatacccaagtattggta
ctagcacctacccgtgagttagctttacaagttgctgacgcatttgaaagctatgcgaaa
caaatgcctacagtcaaagtagctgctatttacggtggcgcacctatgggcgcacagctt
aaagcgatccgcaatggtgtacaagtattggttgctacccctggtagactatgtgatcac
ttacgtcgtgatgctaatttcctatcaggcgtacaattccttgtattagatgaagccgac
gaaatgttaaagcttggttttatggatgatttagaaagcatctttaaaactttgcctaaa
aagcgtcaaacggctttattctctgctactctacctgcatctattaaagcgattgcagaa
aaacaattaaacgaacctaaaaatattaagattgctgctaaaacacaaactgttgaacgt
attgagcaaacttatttaatggtacaccctgatcaaaaaaatgcggctgtactacgttta
ttagaagtagaagactttgatgcattaattgcttttgtgcgcactaaacaagcaacttta
gacttagctactgaattagaaattaaaggctaccgcgttgctgcgctaaatggtgatatt
gcacaaaatcaacgcgaaaaagtgattgaatcattaaaagatggtcgtttagatattgta
gtagctactgacgtagccgcgcgtggtttagatgtaccacgtattactcacgtatttaac
gtggatatgccttatgatccagaatcttacgtacaccgtattggtcgtacgggtcgtgct
ggtcgtacaggtaaagctttattattagttaccccacgtgaacgtcgtatgttacaaacc
atcgagcgtgtaactaaacaagaagtgagtgaagctactttacctaactctcaaagtatt
ttagaagccagaattagacgcttaactaaaaacttacaaccttttactaagccagaagaa
agccaacaacattatgttgagctagttaataaactaactactgatttagattgttcagta
gaagatttagcagttgctttattacgtcgtgcaactaatcgtcgtccattaaccgtggaa
gaaattgagcgtaccgaacctaaactaacccctatcagcaatgctaagcgtgagcctggt
agcagagatcgcaaagaacgtggcgagagaagggaacgtggcgaacgtaaagagcgcggt
gaacgtggcgaaagaagagaaagaggcgaacgtaaagagcgtggtgaacgtagcgaacgc
ggaccaagaatagaacgcgaaggccgttctagcggtcgctctaacgatagagtatcagaa
ggaaaagtacgctgtcgtactcccgttggtagtttagatggtgttgctgccaagaactta
ttaggtgctattcttaatgaagctggcattaataaagatcagattggtaaaatcactatc
cgtgatagctttagtatcgtggaacttcctgaaaaaggattagagaaaatcctaaccaaa
cttaaagatacgcgagtggcaggaaaaccattaaaacttcgtcgctatcgcgaagattaa
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