Aromatoleum aromaticum: ebA1734
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Entry
ebA1734 CDS
T00222
Name
(GenBank) Ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eba
Aromatoleum aromaticum
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eba03016
]
ebA1734
Enzymes [BR:
eba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ebA1734
Transfer RNA biogenesis [BR:
eba03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ebA1734
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CAI07060
UniProt:
Q5P6K1
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All DBs
Position
1007928..1009838
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AA seq
636 aa
AA seq
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MFVLFEEDGAFKAGTVLADNDSSLQVETSHGKRMKLKSSHVLLQFREPAPGDLLERAAAD
AEELDTGFLWEVCGDGEFGFQDFATEYHGHAPNAVEAAAVLLRLHSAPIYFHRKGRGRFR
KAPAEILQAALAGLEKKRQQAEAIERMRSELVAGRMPAELASMLPQLLYRPDRNRVETKA
FEAACVDAGLSAPRLLLKCGALASSYDFHYHRFLFEYFEDGVAFPPFDPPHEPAELARAD
VAAFSIDDATTTEIDDAFSVTPREGGGWRIGIHIAAPALGFARGSSLDAIARRRLSTVYM
PGNKITMLPDAVVEDFTLGAGRECPAVSLYLDVTAALAIVGHESRVERVPIVANLRHHDI
EPLFNDQVLHEQADGPDFQWKRELKLLWDLATVLEAGRGKAEDNRNQVDFNFYVDWQTET
ADGAGYVTISQRRRGSPLDKLVAEMMILANATWGKLLDEAGIPGLYRAQSGGKVRMTTVA
APHDGLGVDCYAWSSSPLRRYVDMVNQWQIISVLRGEPPAFAPKSADLMAALRDFELTYA
AYADFQRQMERYWCLRWLRQQPGIAVDGKVLRDNLVRLETIPLLLKVPSLPVLLPGTRVR
LTIEDSDVLDVDVRARYVETLAEPTPEEAADAALES
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgctgttcgaagaggacggggccttcaaggccgggacggttctcgctgataac
gactcctcgctgcaggtggagacctctcacggcaaacggatgaagctgaaaagcagccac
gtgctgctgcagttccgcgagcccgcgccgggcgacctgctcgaacgcgccgcggccgac
gccgaggaactggacaccggttttctgtgggaagtgtgcggcgacggcgagttcggcttc
caggacttcgccaccgagtaccacggccacgcgccgaacgccgtcgaagccgccgccgtg
ctgctgcgcctgcattcggcgccgatctatttccaccgcaaggggcgcgggcgtttccgc
aaggctcccgccgagatcctgcaggcggccctcgccggcctggaaaagaagcgccagcag
gccgaagcgatcgagcgcatgcgcagcgaactcgtcgcaggacgcatgccagccgaactc
gcaagcatgctgccgcagctgctgtaccgcccggaccgcaaccgcgtcgagaccaaggcg
ttcgaggcggcatgcgtcgacgccggcctgtcggcgccgcggctgctgctcaagtgcggc
gcgctcgcgtcgagctacgatttccactatcaccgcttcctgttcgaatatttcgaggac
ggcgtcgcgttcccgcctttcgacccgccgcacgagccggccgagctggcgcgcgctgat
gtcgcggcgttctcgatcgacgacgcgacgacgaccgagatcgatgacgcattctcggtg
acgccgcgcgaaggcggcggctggcgcatcggcatccacatcgccgcgccggcgctcggc
ttcgcgcgcggctcgtcgctcgacgcgatcgcgcgacggcgcctgtcgacggtgtatatg
ccgggcaacaagatcacgatgctgcccgacgcggtcgtcgaggacttcacgctcggggcc
gggcgcgagtgtccggcggtgtcgctttacctcgacgtcaccgcggcgctcgcgatcgtc
ggccacgagagccgcgtcgagcgcgtgccgatcgtcgcgaacctgcgtcatcacgacatc
gagccgctcttcaacgaccaggtgttgcacgagcaggccgacggcccggacttccaatgg
aagcgcgagctgaagctgctgtgggacctcgcgacggtccttgaggccgggcgcggcaag
gccgaggacaaccgcaaccaggtcgacttcaacttctacgtcgactggcagaccgagact
gcggacggcgccggctacgtgacgatctcgcagcgccggcgcggttcgccgctcgacaag
ctggtcgccgagatgatgatcctcgcgaacgcgacctggggaaaactgctcgacgaggcc
ggcatcccggggctgtaccgcgcgcagagcggcggcaaggtgcgcatgacgacggtcgcc
gcgccacacgacgggctcggcgtcgattgctacgcgtggtcgagctcgccgctgcgccgc
tacgtggacatggtcaaccagtggcagatcatctcggtgctgcggggcgagccgccggcg
ttcgcgccgaagtcggcggacctgatggcggcactgcgcgacttcgaacttacctacgcc
gcgtatgccgatttccagcgtcagatggagcgctactggtgcctgcgctggttgcgccag
cagcccggcatcgcggtcgatggcaaggtgctgcgcgacaatctcgtgcgcctcgagacg
attccgctgctgctgaaagtgccgtcgctgccggtgctgctgccgggcacccgcgtgcgc
ctgacgatcgaggacagcgacgtgctcgacgtcgatgtccgcgcgcgctacgtcgagacg
ctcgccgagccgactccggaagaggccgcagacgccgcgctggaaagctga
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