Aromatoleum aromaticum: ebA2970
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Entry
ebA2970 CDS
T00222
Symbol
uvrA2
Name
(GenBank) similar to excinuclease ABC subunit A (DNA repair ATP-binding)
KO
K03701
excinuclease ABC subunit A
Organism
eba
Aromatoleum aromaticum
Pathway
eba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ebA2970 (uvrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA2970 (uvrA2)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ebA2970 (uvrA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ebA2970 (uvrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_29
nSTAND1
UvrA_DNA-bind
AAA_21
SMC_N
AAA_16
Viral_helicase1
RsgA_GTPase
AAA_33
AAA_22
NACHT
AAA_23
AAA_25
DnaJ_CXXCXGXG
AAA_18
nSTAND3
DUF7351
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
CAI07797
UniProt:
Q5P4G6
LinkDB
All DBs
Position
complement(1768467..1774130)
Genome browser
AA seq
1887 aa
AA seq
DB search
MSDHIRIVGARQNNLKNLSLDIALNEITVVTGVSGSGKSSLVFDTLYAEGQRRYVETFSP
YARQFLDRMDKPQVDRIEGVPPAIAIDQTNPVKSSRSTVGTMTELADHFKLLYARAARLY
CRGCGAPVRRDDPDSIFAALVERCAADDPRLVLTFAVPVPANFSEDEITALLNRQGYTRI
HLRESAPAGDLLHVVQDRLRLSNAGRSRVIEAIETALQHGHGHLAVCAQHDGGETVWRFS
RDLHCADCDIHYAEPTPGLFSFNSPLGACETCRGFGRVIGVDFALVIPDESKTLAEGAVK
PWQTASYRECQEDMAKMAKKYGVAMDIPFRDLPPEHRRWVLEGDPEWKSWDASWPRKWYG
VRHFFDWLESKAYKMHIRVLLSRYRSYTECPACHGARLKPEALLWRLGDGNPADSRRPGL
AIHELMALPVSRVRDFIARIELPAGLDEATGLLLGEIRSRLDYLANVGLAYLTLDRQSRT
LSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDIDRILAVMTRLRDAGNTLVVVEH
DPQLMRAADRLLDIGPGPGERGGEIVGYAPPATITADPASLTGAYLAGRKRVDAGRRLRP
VLPGDPLLRLVGAREHNLRGIDVDFPLGRLVCVSGVSGSGKSSLIQDVLYPALAKRFGQG
SDATGAFARLEGAETLAGVVMVDQSAIGKSARSNPVSYVGAWDAIRALFAALPEATSRGY
TPGTFSFNAGTGRCPTCNGSGFEHVEMQFLSDVYLRCPDCDGKRYRPEVLELAWRGRSVA
DVLALTVSEALAFFADQPAVQAALAPLADVGLDYLRLGQPVPTLSGGEAQRLKLAGHLAD
SAKLAGRRPAGKAARSNAQAPGRLLFLFDEPTTGLHFDDVATLLRAFEKLLDAGHALVVI
EHNLDVLRAADWIIDLGPEGGEDGGTLVVAGPPDAVIACAASHTGRALRAYDAEFAAEAP
GAPPANGLVAAEPAARYRPAAPAIEIRHAREHNLKNVSLSIPRDRFTVITGLSGSGKSTL
AFDIVFGEGQRRYLESLNAYARQFVQPAARPDVDALFGIPPTVAIEQRVSRGGRKSTVGT
LTEIQPFLRLLYVKLGTQYCPQCDVPVSPQSFDAIAAQVQRDYRGTSIELLAPLVTNRKG
LYTAIAKWAKGKGYTQLRVDGEYVPTAKWPRLDRYVEHTIELPVGMVVVAPEHEAALRMQ
LAEALEHGKGVVKVLELGKLGASPATFSTLRACPCCGDSFPEPDPRLFSYNAKHGWCPSC
YGTGQHVVGRVEDANELDLADTEQVTDAVCAACEGTRLNPVARAVRFRERGIHELSAQPV
AALAAFFDGLRLVGREIDIARDLVAEIRGRLDFLQQVGLAYLALDRGAPTLSGGEAQRIR
LAAQLGSNLRGVCYILDEPTIGLHPRDNRLLLDTLERLRDRGNTLLVVEHDEETIRRADH
VIDLGPGAGVRGGRVVAEGRLADLIAAPESATGAFLRAPLQHPLRPRRPLDDAHPAIRVV
GANLHNLRDVSAAVPLARLTVVTGVSGSGKSTLARDVIHANLGKLLGDPDAARARRRGQA
QPQRSDVELLGCRAIEGWQAIGRVLEVDQTPIGKTPRSCPATYVGFWDAVRKLFAETFEA
RTRGWSASRFSFNTGAGRCPVCEGQGQTTVEMSFLPDVKLPCDACGGARFNPETLAVRWR
DKTVADVLAMPVDEAVGFFAAHPSIAHPLALLQDVGLGYLTLGQSSPTLSGGEAQRIKLV
TELAKVRSRAGDSTPMRAATAGRPLPAEKHTLYVLDEPTVGLHMADVDKLIRVLQRLADA
GHTVLAIEHDLDVMAEADWLIDLGPEGGDGGGEIVAQGPVEAVCECFASHTAVILKEFLA
ARSVVSVGTPAEPSPPARPERRPVPPS
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccacatccgcatcgtcggcgcacgccagaataacctgaagaacctctcgctc
gacatcgcgttgaacgagatcacggtggtcaccggcgtgtcggggtcgggcaagtcgtcg
ctggtgttcgacacgctgtatgccgaagggcagcggcgctacgtcgagacgttctcgccg
tacgcgcgccagtttctcgaccggatggacaaaccgcaggtcgatcgcatcgaaggcgtg
ccgccggcgatcgcgatcgatcagaccaacccggtgaagagctcgcgctcgacggtcggc
acgatgaccgagctcgccgaccacttcaagctgctctatgcccgcgccgcgcggctgtat
tgccggggctgcggcgcaccggtgcggcgtgacgatccggacagcatctttgctgcgctc
gtcgagcgctgcgccgcggacgatccgcgcctcgtgctgacgttcgcggtcccggttccg
gcgaatttcagcgaggacgagatcactgcgctgctgaaccggcagggctatacgcgcatc
cacctgcgcgaatccgcgccggcaggcgatctgctgcacgtcgtgcaggatcgcttgcgc
ttgtcgaacgcggggcgcagccgcgtcattgaagccatcgagacggcgttgcagcacggc
cacgggcacctcgcggtgtgcgcccagcatgacggcggcgaaacggtatggcgcttttcc
cgcgacctgcactgcgccgactgcgacatccattacgccgagccgacgccgggcctgttc
tcgttcaactcgccgctcggcgcgtgcgaaacctgccgcggtttcggccgcgtcatcggc
gtcgatttcgccctcgtgatcccggacgaatcgaagacgctcgccgaaggcgccgtcaaa
ccctggcagaccgcgagctaccgcgaatgccaggaagacatggcgaagatggcgaagaaa
tacggcgtggcgatggacatcccgtttcgcgacctgccgccggaacatcgtcgctgggtg
ctcgaaggcgatccggagtggaaaagctgggacgcgtcctggccgcgcaagtggtacggc
gtgcgccacttcttcgactggctcgagagcaaagcctacaagatgcacatccgcgtgctg
ctgtcgcgttaccgcagctacacggagtgcccggcctgtcacggcgcaaggctgaagccg
gaagcgctgctgtggcggttgggtgacggaaaccctgcggattcgcgccgccccggcctt
gcgatccacgaactgatggcgcttcccgtcagccgcgtgcgcgatttcatcgcccgcatc
gaactgccggccggcctcgacgaagcgaccggactgctgctcggcgagatcaggagccgc
ctcgactacctcgccaacgtcgggctggcgtatctcacgctcgaccgccagtcgcgcacg
ctgtcgggcggcgaagtgcagcgcatcaacctgacgactgcgctcggcacttcgctcgtc
aatacgctgttcgtcctcgacgagccgtcgatcggcctgcatccgcgtgacatcgaccgt
atcctcgcggtaatgacacggctgcgcgacgcgggcaacacgctcgtcgtcgtcgaacac
gacccacagctgatgcgcgcggccgaccgcctgctcgacatcggacccggtcccggcgag
cgcggcggcgagatcgtcggctacgcgccgcccgccacgattacggccgacccggcgtcg
ctgaccggcgcctatctcgccgggcgcaagcgcgtcgatgccggccgccggctgcgcccg
gtcttgccgggcgacccgctgctgcggctcgtcggcgcgcgcgagcacaacctgcgcggc
atcgatgtcgattttccgcttggccgcctggtatgcgtcagcggcgtgtccggttcgggc
aagtcgagcctgatccaggacgtgctgtacccggcgctggcgaagcgtttcggccagggc
agcgacgcgaccggcgcgttcgcgcgcctcgaaggcgccgaaacgcttgccggcgtcgtc
atggtcgaccagtcggcgatcggcaagagcgcgcgctcgaatccggtcagctacgtcggc
gcgtgggacgcgatccgcgcgctgttcgccgcactgcccgaagcgacaagccgcggctac
acgcccggcacgttcagcttcaacgccggcaccggccgttgcccgacctgcaacggctcg
ggcttcgaacacgtcgagatgcagttcctgtccgacgtctatctgcgctgcccggactgc
gacggcaagcgctaccggccggaagtgctcgagctcgcgtggcgcggccggtcggtcgct
gacgtgctcgcgctgacggtgtcggaagcgctcgcgttcttcgccgaccagcctgcggtc
caggctgcgctcgcgccgctcgccgatgtcggcctcgactacctgcggctcggccagccg
gtgccgacgctgtcgggaggcgaagcgcagcgcctgaagcttgccggccatctcgccgat
tcggcgaaactcgccggccgccgacctgccggcaaagctgcgcgcagtaacgcgcaagcg
cccggccggctgctgttcctgttcgacgagccgaccaccgggctgcatttcgacgacgtc
gcgacgctgctgcgggcgttcgaaaagcttctcgatgcgggccatgcgctggtcgtcatc
gaacacaacctcgacgtgctgcgcgccgccgactggatcatcgatctcggcccggaaggc
ggcgaggacggcggcaccctcgtcgtcgccgggccgccggacgccgttatcgcctgcgcc
gcgtcgcataccggccgcgcgttgcgcgcgtatgacgcggaattcgcggcggaggcgccc
ggcgcgccccccgcgaatggcctcgtggccgccgaacccgctgcgcgttaccgccccgcc
gcgccggcgatcgagatccgccacgcgcgtgagcacaacctgaagaacgtcagcctgtcg
atcccgcgcgaccgcttcaccgtgatcaccggcctgtccggctcgggcaaatcgacgctc
gcattcgacatcgtgttcggcgaagggcagcgccgctacctcgaatcgctgaacgcctac
gcgcgccagttcgtccagccggccgcgcgcccggacgtcgatgcgctgttcggcattccg
ccgacggtcgcgatcgagcagcgcgtgagccgcggcggcaggaagagcacggtcggcacg
ctgaccgagatccagccgttcctgcgcttgctgtacgtcaagctcggcacgcagtactgc
ccgcagtgcgacgtgccggtgtcgccgcagagcttcgatgcgatcgccgcgcaggtccag
cgtgattaccgcggcacatcgatcgagctccttgcgccgctcgtgacgaaccgcaagggc
ttgtacacggcgatcgcgaaatgggcgaaaggcaagggatatacgcagctgcgcgtcgat
ggcgagtacgtgccgactgccaaatggccgcgcctcgaccgctacgtcgagcacacgatc
gagctgccggtcggcatggtcgtcgtcgcgccggagcacgaggcggcgctgcgcatgcag
ctcgccgaagcgctcgaacacggcaagggcgtcgtcaaggtgctcgagctcggcaaactc
ggcgcgagtccggccacgttctcgacgctgcgcgcctgcccgtgctgcggcgacagcttt
ccggaaccggatccgcgcctgttctcgtacaacgccaaacacggttggtgcccgagctgc
tacggcacggggcagcacgtcgtcggccgcgtcgaggatgcgaacgaactcgatctcgcc
gacaccgagcaggtgaccgacgcagtctgcgcggcgtgcgagggcacgcggctgaacccg
gtcgcgcgcgcggtacgtttccgcgagcgcggcatccacgaactgtcggcgcagccggtc
gcggcgctcgccgcgttcttcgacggcctgcggctcgtcgggcgcgagatcgacatcgcg
cgcgacctcgtcgccgagattcgcggccggctcgacttcctgcagcaggtcgggctcgcg
tacctcgcgctcgaccgcggcgcgccgacgctgtcgggcggcgaggcgcagcgcatccgg
ctcgccgcgcagctcggctcgaacctgcgcggcgtgtgctacatcctcgacgagccgacg
atcgggctgcatccacgcgacaaccgcctgctgctcgacacgctcgagcggctccgcgac
cgcggcaacaccttgctcgtcgtcgaacacgacgaggagacgatccgccgcgccgaccat
gtcatcgacctcggtcccggcgccggcgtgcgcggcggccgcgtcgtcgccgaaggtcgc
ctcgcagacctgatcgctgcgcccgaatcggcgaccggcgctttcctgcgcgcgccgctg
cagcatccgctgcgtccgcgccggccgctcgacgacgcgcatccggcaatccgcgtcgtc
ggggcgaacctgcacaacctgcgcgacgtgtcggccgccgtcccgctcgcgcgcctgacg
gtcgtcacaggcgtgtccggctcaggcaaatcgacgctcgcgcgcgacgtgatccacgcg
aacctgggcaagctgctcggcgacccggacgcagcgcgcgcgcggcgccgcggccaggcg
cagccgcagcgcagcgatgtcgagttgctcggctgccgcgcgatcgaaggctggcaggcg
atcggccgcgtgctcgaagtcgaccagacgccgatcggcaagacgccgcgctcatgcccg
gcgacctacgtcggcttctgggacgcagtccgcaagctgttcgccgagactttcgaagcc
aggacacgcggctggagcgcgtcgcgcttctcgttcaacaccggcgccgggcgctgcccg
gtgtgcgaagggcagggccagacgacggtcgagatgagcttcctgccggacgtcaagctg
ccgtgcgacgcgtgcggcggcgcgcgcttcaatcccgagacgcttgcggtgcgctggcgc
gacaagacagtcgccgacgtgctcgcgatgccggtcgacgaagcggtcgggttcttcgcc
gcgcatccgtcgatcgcccacccgctcgcgctgctgcaggacgtcggcctcggctacctg
acgctcggccagtcgagcccgacgctgtccggcggcgaagcgcagcgcatcaagctggtc
accgaactggcgaaagtgcgcagccgcgccggcgacagcaccccaatgcgtgcggcgacc
gccggacggccgctgccggcggaaaagcacacgctgtatgttctcgacgagccgaccgtc
gggctgcacatggcggacgtcgacaagctgatccgcgtgctgcagcggctcgccgacgcc
ggccatacggtgctggcgatcgagcacgatctggacgtcatggccgaagcggactggctg
atcgatctcggcccggaaggcggagacggcggcggcgaaatcgtcgcgcaggggccggtc
gaggccgtgtgcgagtgtttcgcttcgcacacggcagtgatcctcaaagagttcctcgcc
gcacgcagcgtggtgtccgtgggtacgccggcggagccctctccgccggcgcggccagaa
cgacgcccggttccgcctagttga
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