Aromatoleum aromaticum: ebA3111
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Entry
ebA3111 CDS
T00222
Symbol
sbcD
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
eba
Aromatoleum aromaticum
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA3111 (sbcD)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ebA3111 (sbcD)
Archaeal homologous recombinant proteins
ebA3111 (sbcD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Ploopntkinase3
Motif
Other DBs
NCBI-ProteinID:
CAI07869
UniProt:
Q5P494
LinkDB
All DBs
Position
complement(1855047..1856327)
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AA seq
426 aa
AA seq
DB search
MRLLHTSDWHLGQSLHDFDRTYEHQQFLDWLLALIATERPDVLLIAGDVFDNANPSAGAQ
HQLYRFLTAARERMPHLSIVIIAGNHDSPGRLEATSPFLELFDAAVVGHVHRRPDQSIDV
ERLVVPLKNREGTVAAWCLAIPFLRPGDVPRVDHEGEGEHDAYLAGVAELYRRALAVAQS
RRQPGQAIVAMGHCHMAHGKLSELSERRIVVGGAEALPAGIFDAAIAYVALGHLHLAQAV
GGRDHIRYSGSPLPMSFAELDYPHQVMCVELDGEAVAEIRPVRVPRSVELIRVPKTHASI
DEVLPLLEALDPGVAADGPAHAHPYLEVRVRLDAPEPGLRVRIEAALAGKPVRLARIDPA
SSPRGDAPASSAMSLGDLERLAPETVFARLCEQRLSGDPGEHEALLGALAAAFAELAIEP
AEGASA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcctgcacacttccgactggcatctcggccaatccctgcacgacttcgaccgc
acgtacgagcatcagcaattcctcgactggctgctggccctgatcgccaccgagcggccg
gatgtcctgctgatcgccggcgacgtcttcgacaacgcgaatccgtcggccggcgcacag
caccagctgtaccgtttcctcaccgccgctcgcgagcgcatgccccatctgtcgatcgtc
atcatcgccggcaatcacgactcgccggggcggctcgaagcgacttcaccgttcctggag
ctgttcgacgcggccgtcgtcggccacgtccatcgccgtcccgatcagtcgatcgacgtc
gagcgcctggtggtgccgctgaagaatcgcgaagggactgtcgccgcgtggtgcctcgcg
atcccgttcctgcgcccgggcgacgtgccccgcgtcgaccacgaaggcgaaggcgagcac
gacgcgtatctcgcgggcgtcgccgagctttatcgccgggcgcttgcggtggcgcaatca
cgccgccagccggggcaggcgatcgtcgcaatgggacattgccatatggcccacggcaag
ctctcggaactctcggaacgacgcatcgtcgtcggcggcgccgaggcgctccccgccggc
attttcgacgcggcgatcgcctatgtcgcactcgggcacctgcacttggcgcaagcggtc
ggcggccgcgaccacattcgttacagcggcagcccgttgccgatgtcgttcgccgaactc
gactatccgcaccaggtcatgtgcgtagagctcgacggcgaagcagtcgccgaaattcgc
ccggtacgcgtgccgcgcagcgtcgagctgatccgcgtgccgaagacccatgcgtcgatc
gacgaagtcctgcccttgctcgaagcgctcgatccgggcgtcgcagccgacggtcccgcc
cacgcccatccctacctcgaagtgcgcgtgcggctcgacgctcccgagccggggctgcgc
gttcgaatcgaggcggcgcttgccggcaagccggtgcggctcgcgcgcatcgacccggcc
agttcgccgcggggcgatgcgcccgccagttccgcaatgtcgctcggcgacctcgaacgg
ctcgcgccggaaacggtgttcgcgcgcttgtgcgaacagcgcctcagcggcgatcccggg
gaacacgaagctctgctcggcgcgctcgcagcggctttcgccgaactcgcgatcgagccc
gccgagggggcgtccgcatga
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