Aromatoleum aromaticum: ebA3853
Help
Entry
ebA3853 CDS
T00222
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase (alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eba
Aromatoleum aromaticum
Pathway
eba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ebA3853 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eba03021
]
ebA3853 (rpoA)
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA3853 (rpoA)
Enzymes [BR:
eba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ebA3853 (rpoA)
Transcription machinery [BR:
eba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ebA3853 (rpoA)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ebA3853 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
CAI08307
UniProt:
Q5P307
LinkDB
All DBs
Position
2273270..2274250
Genome browser
AA seq
326 aa
AA seq
DB search
MQSNSLLKPRIIDVQSVSPVQARVTMEPFERGFGHTLGNALRRILLSSLPGYAPTEVSIE
GVLHEYSTLDGVREDIVDLLLNLKGVVLKLHSRSEATLRLAKSGDGVVTARDIEVGHDVE
IINPDHVIAHLAPGGKLDMQIKVEEGRGYVPGNVRPAAGDTKTIGRVVLDASFSPVRRVS
YLVESARVEQRTDLDRLVIDIETNGAVDPEEAIRYAARVLMDQLSVFADLEGTAPVVEQS
AAQTIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIK
EVLASRGLTLGMKLENWPPAGLEKLG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaattcgctgctgaaaccccgcatcatcgacgtccagagtgtgtcgccggtc
caggcccgcgtcacgatggagccgttcgaacgcggtttcggccataccctggggaatgcg
ctgcggcgcattctcctgtcctcgttgccgggctatgcgccgaccgaagtgtccatcgaa
ggcgtgctgcatgagtattccactcttgacggcgtgcgcgaggacatcgtcgatctgctg
ttgaacctcaagggcgtggtgctcaagctccatagccgcagcgaggcgacgctgcgcctg
gcgaagtctggcgatggtgtggtcaccgcgcgcgacatcgaggttgggcacgacgtggaa
attatcaacccggatcatgtgattgcgcacctcgcgccgggcggaaagctcgacatgcag
atcaaggtcgaggaaggccgcggttacgtgccgggcaacgttcgtccggctgccggcgac
accaagaccatcggccgcgtcgtgctcgatgcatccttcagcccggtgcggcgcgtgagt
tacctggtcgagagcgcccgggtggaacagcggaccgatctcgaccggctggtgatcgac
atcgaaacgaacggcgcagtggatcccgaggaggccatccgctatgcggcgcgcgtcctg
atggatcagctgtcggtgttcgccgatctcgaaggcactgcaccggtcgtcgaacagtcc
gcggcgcagacgatcgacccggtgctgctgcgcccggtggatgatctggagctgacggtt
cgctcggccaactgcctgaaggccgaaaacatctactacatcggtgacctgatccagcgc
acggagaccgagctgctgaagacgccgaacctcggccgcaagtcgctgaacgagatcaag
gaagtgttggcctcccgcgggctgacgctcggaatgaaactggaaaactggccgccggcc
gggctcgagaagctcggttga
DBGET
integrated database retrieval system
