Aromatoleum aromaticum: ebA3958
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Entry
ebA3958 CDS
T00222
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
eba
Aromatoleum aromaticum
Pathway
eba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ebA3958 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA3958 (ruvB)
Enzymes [BR:
eba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ebA3958 (ruvB)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ebA3958 (ruvB)
RecFOR pathway proteins
ebA3958 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
AAA_22
nSTAND3
AAA_3
Rad17
AAA_14
AAA_2
DUF815
AAA_18
TsaE
TniB
NTPase_1
AAA_17
AAA_33
AAA_28
RNA_helicase
Bac_DnaA
AAA_24
AAA_25
IstB_IS21
bpMoxR
ABC_tran
Zeta_toxin
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CAI08367
UniProt:
Q5P2U7
LinkDB
All DBs
Position
complement(2331926..2332987)
Genome browser
AA seq
353 aa
AA seq
DB search
MIETDKLQAPRVISAQTADRQEDVVERALRPKRLAEYVGQAKIREQLEIFIQAAKNRHEA
LDHVLLFGPPGLGKTTLAHIVAAEMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLFIDE
IHRLSPVVEEILYPALEDFQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPLRDR
FGIVARLEFYTPHELAYIVGRSAGLLDVAIDDAGAVEIARRARGTPRIANRLLRRVRDYA
QVKADGDITAPVADAALLMLDVDHLGLDLMDRKLLGAMLEKFGGGPVGLDNLAAAIGESS
DTIEDVLEPYLIQQGYLQRTPRGRIASASIWQHFGLAFPRRAGDESAELFSAP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccgacaaactgcaggccccgcgggtgatttcggcgcagactgccgaccgc
caggaagacgtcgtcgagcgcgcgctgcggccgaagcggctggccgaatatgtcggccag
gcaaagatccgcgaacagctcgaaatcttcatccaggcggcgaagaaccgccacgaggcg
ctcgaccacgtgctgctgttcggcccaccgggcctgggcaagacgacgctcgcgcacatc
gtcgctgccgagatgggcgtgaacctgcgccagacttcggggccggtgctcgaacgggca
ggcgacctcgccgcactgctgacgaacctcgaaccgcacgacgtgctgttcatcgacgag
atccaccgcctgtcgccggtcgtcgaggaaatcctttatccggcactcgaggatttccag
atcgacatcatgatcggcgaagggcctgcggcgcgctcggtcaagctcgacctgccgcct
ttcacgctggtcggcgcgacgacgcgcgccgggatgctgacgaacccgctgcgcgaccgt
ttcggcatcgtggcgcggctcgagttctacacgccgcacgagctcgcatacatcgtcggg
cgctccgccggcctgctcgatgtcgcgatcgacgacgccggagcggtcgagatcgcgcgg
cgcgcccgcggcacgccgcggatcgcgaaccggctgctgcgccgcgtccgcgactatgcg
caagtcaaagccgacggcgacatcaccgcccccgtcgccgacgccgcgctgctgatgctc
gacgtcgatcacctcgggctcgacctgatggaccgcaagctgctcggcgcgatgctcgag
aagttcggcggcggcccggtcggcctcgacaacctcgcggccgcgatcggcgagtcgtcc
gacacaatcgaggacgtgctcgaaccgtacctgatccagcagggctacctgcagcgcacg
ccgcgcgggcgcatcgcgagcgcatcgatctggcagcatttcggcctcgcctttccccgc
cgcgccggcgacgaaagcgcggagctgttttccgctccctga
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