Aromatoleum aromaticum: ebA3964
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Entry
ebA3964 CDS
T00222
Symbol
cafA
Name
(GenBank) ribonuclease G (RNase G)
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
eba
Aromatoleum aromaticum
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eba03019
]
ebA3964 (cafA)
03009 Ribosome biogenesis [BR:
eba03009
]
ebA3964 (cafA)
Messenger RNA biogenesis [BR:
eba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ebA3964 (cafA)
Ribosome biogenesis [BR:
eba03009
]
Prokaryotic type
rRNA processing factors
ebA3964 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CAI08370
UniProt:
Q5P2U4
LinkDB
All DBs
Position
complement(2334634..2336088)
Genome browser
AA seq
484 aa
AA seq
DB search
MSIEFLINFTPQETRVAIVEQGVVQELHVERTASRGIVGNIYLGRVVRVLPGMQSAFIDI
GLERTAFLHVADIWSDRHNGDAGRPIERILAEGQNLTVQVLKDPIGTKGARLSTQISIAG
RLLVYLPQEKHIGISQRIEDESEREALRERLTRLVPADEAGGFIVRTMAESASDDELGAD
IGYLRKLWSEIRNSATGRFPPSLLYEDLGLGQRVLRDLVDDDTSRILVDSRENHQKLTAF
AAEYSPKVLPLLEHYSGERPLFDLHNVEDEIQKALARRVSLKSGGYLIIDQTEAMTTIDV
NTGGFVGARNFDDTIFKTNLEAAQTIARQLRLRNLGGIIIIDFIDMENVEHRDMVLDEFQ
KALARDHTKMTVNGFTALGLVEMTRKRTRESLAHLLCEPCPTCDGRGEVKTARTVCYEIL
RELLREARQFNAREFRVLAAPNVIDLFLDEESQSLAMLSDFIGKQISLHPEASYSQEQFD
IVLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaatttctcatcaacttcacgccgcaggagacgcgcgtcgcgatcgtcgag
cagggcgtcgttcaggaactgcacgtcgagcgcactgccagccgcggcatcgtcggcaac
atctacctcggccgggtcgtgcgggtgctgcccggcatgcagtccgcgttcatcgacatc
ggcctcgagcgcaccgcctttcttcatgtcgccgacatctggagcgatcgccacaacggc
gacgccgggcggccgatcgagcgcatcctcgccgaaggtcagaaccttacggtacaggtg
ctgaaggacccgatcggcaccaaaggcgcgcgcctgtcgacgcagatcagcatcgccggg
cggttgctcgtgtacctgccgcaggaaaagcacatcggcatctcgcagcgcatcgaggac
gaatccgagcgcgaggcgctgcgcgagcgcctgacgcgactcgtgccggcggacgaagcc
ggcggcttcattgtccgcacgatggccgaatcggcttccgacgacgaactcggtgccgac
atcgggtacctgcgcaagctgtggagcgagatccgcaacagcgcgaccgggcgttttccg
ccgagcctgctgtacgaagacctcggcctcggccagcgcgtgctgcgcgacctcgtcgat
gacgacacttcgcgcatcctcgtcgattcgcgcgagaaccaccagaaactcaccgctttc
gccgccgagtacagccccaaggtgctgccgctgctcgagcactacagcggcgagcggccg
ctgttcgacctgcacaacgtcgaggacgagatccagaaagcgcttgcgcggcgggtcagt
ctcaagtccggcggctacctcatcatcgaccagaccgaagcgatgacgaccatcgacgtc
aacaccggcggtttcgtcggcgcgcgcaacttcgacgacacgatcttcaagaccaacctc
gaggcggcgcagacgatcgcccgccagctgcgcctgcgaaacctcggcggcatcatcatc
atcgacttcatcgacatggaaaacgtcgagcatcgcgacatggtgctcgacgagttccag
aaggcgctcgcgcgcgaccacaccaagatgacggtaaacggcttcaccgcgctcggcctc
gtcgaaatgacgagaaagcgcacacgcgagtcgctcgcccatctcctgtgcgaaccctgc
ccgacctgcgacggccgcggcgaagtcaagaccgcgcgcaccgtgtgctatgaaatcctg
cgcgaactgctgcgcgaggcgcgccaattcaacgcgcgcgagttccgcgtgctcgccgca
ccgaacgtcatcgacctcttcctcgacgaggaatcccagtcgctcgcgatgctgtcggac
ttcatcggcaagcagatctcgctgcatccggaagcgagctactctcaggaacagttcgac
atcgtgctgctgtga
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