Aromatoleum aromaticum: ebA4224
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Entry
ebA4224 CDS
T00222
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eba
Aromatoleum aromaticum
Pathway
eba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ebA4224 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eba03019
]
ebA4224 (recQ)
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA4224 (recQ)
Enzymes [BR:
eba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ebA4224 (recQ)
Messenger RNA biogenesis [BR:
eba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ebA4224 (recQ)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ebA4224 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
CAI08510
UniProt:
Q5P2F4
LinkDB
All DBs
Position
complement(2487487..2489319)
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AA seq
610 aa
AA seq
DB search
MPLMTPVAASPSSLHLLEHVFGYTAFRGEQAAIVEHVAAGGDALVLMPTGGGKSLCFQIP
ALMRTGTAVVVSPLIALMQDQVSALREAGVAAAYLNSSQAADESAAVERDLVAGRLDLLY
VAPERLLTARLLATLDRLHEAGRIALFAIDEAHCVSQWGHDFRPEYLQLSVLSERFPAVP
RIALTATADPETREEIARRLALGDARRFVSSFDRPNIRYRMVDKDNPRAQLLAFIRDDHA
GEAGIVYCLSRRKVEETAAWLGEQGIRALPYHAGMAQETRAAHQSRFLREDGIVMVATIA
FGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLAAQAWMAWGAQDVVQQRRMIDES
EGADEFKWRARARLDALVGLVETTGCRRQFLLAHFGEAGEACGNCDNCLEPPRTWDATDA
ARRALSGVFRTGQRFGAGHVIDVLRGELTDKVRDWKHDQVSTFGIGADLDEKTWRTLFRQ
LVARGLLAVDHDRHSALTLTDLARPLLRGEAEFALRLAPEKRRAKRSRSTRLDIPDGVPL
TLFDRLRAWRAATARERNVPAYVIFHDATLREIALARPATLAELAGISGIGDRKLDAYGA
DILAEIAREV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgatgactcccgttgcagcttccccctcctcgcttcaccttctcgaacacgtc
ttcggttacaccgccttccgtggcgagcaggcggcgatcgtcgaacacgtcgctgccggc
ggcgacgcgctggtgctgatgcctaccggcggcggcaagtcgctgtgcttccagatcccg
gcgctgatgcgcacgggcactgcggtggtcgtgtcgcctctgatcgcgctgatgcaggac
caggtcagcgcgctgcgcgaagccggcgtcgcggccgcctatctgaactccagccaggcc
gccgacgagtccgccgcggtcgagcgcgatctcgtcgccggacggctcgacctgctgtac
gtcgcgcccgaacgcctgctgacggcgcgcctgctcgcgacgctcgacaggctgcacgag
gccggacgcatcgcgctgttcgcgatcgacgaggcgcactgcgtgtcgcagtggggccac
gacttccgcccggaatacctgcagctgtcagtgctgtccgaacgcttcccggcagtgccg
cggatcgcgctgaccgccaccgccgaccccgaaacccgcgaggagatcgcccggcgcctc
gcgctcggcgacgcccgccgcttcgtgtcgagcttcgaccggccgaacatccgctaccgc
atggtcgacaaggacaacccgcgcgcccagctgctcgcgttcatccgcgacgatcacgcc
ggcgaagcaggcatcgtgtattgcctgtcgcggcgcaaggtcgaggaaacggcggcatgg
ctcggcgaacagggcatccgtgcccttccctaccacgccggcatggcgcaggaaacccgc
gccgcgcaccagagccgcttcctgcgcgaagacggcatcgtcatggtcgcgacgatcgcg
ttcggcatgggcatcgacaaacccgacgtgcgcttcgtcgcccacctcgacctgccgcgc
tcgatcgaaggctactaccaggagaccggccgggccgggcgcgatggactcgcggcgcag
gcgtggatggcgtggggcgcgcaggacgtcgtgcagcagcggcgcatgatcgacgagtcc
gaaggcgcggacgaattcaagtggcgggcgcgggcgcgactcgacgcactggtcggcctg
gtcgaaacgaccggctgccgccgccagttcctgctcgcgcatttcggcgaagccggcgaa
gcgtgcggcaactgtgacaactgtctcgagccgccgcgcacgtgggatgcgaccgacgcc
gcgcgccgggcgctgtcgggcgtgttccgcaccggccagcgcttcggcgccggccacgtc
atcgacgtgctgcgcggcgaactcaccgacaaggtgcgcgactggaagcacgaccaggtc
agcacgttcggcatcggcgccgacctcgacgaaaaaacctggcgcaccctgttccgccag
ctcgtcgcgcgggggctcctcgccgtcgaccacgaccgccacagcgcgctgacgctgacc
gacctcgcccgcccgctgctgcgcggcgaagccgagttcgcgctgcgcctggcgccggaa
aaacgccgtgcgaagcgcagccgcagcacacgcctggatatcccggacggcgtgccgctg
accttgttcgaccgcctgcgggcgtggcgggcggcgaccgcgcgcgaacgcaacgtaccc
gcctacgtgatcttccacgacgcgacgctgcgcgaaatcgcgctcgcgcggcccgcgacc
ctcgccgagctcgcgggcatttcgggcattggcgaccgcaagctcgacgcgtacggcgcc
gacatcctcgccgagatcgcgcgcgaagtctga
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