Aromatoleum aromaticum: ebA4365
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Entry
ebA4365 CDS
T00222
Symbol
rpoD
Name
(GenBank) DNA-dependent RNA polymerase sigma subunits (Sigma70/32)
KO
K03086
RNA polymerase primary sigma factor
Organism
eba
Aromatoleum aromaticum
Pathway
eba02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ebA4365 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eba03021
]
ebA4365 (rpoD)
Transcription machinery [BR:
eba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ebA4365 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CRISPR_Cse2
Halogen_Hydrol
Motif
Other DBs
NCBI-ProteinID:
CAI08599
UniProt:
Q5P265
LinkDB
All DBs
Position
complement(2581941..2583932)
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AA seq
663 aa
AA seq
DB search
MAREKTKDSRKDSPKGRASRAKDKGVLVAEGPQVAPLDAEVRRTRLKTLITLGKERGYLT
YAEISDHLPDDVADAEQIEGIIATFNNMGIRVFDEAPAAEDLLMSDAVPSSVDEDVAEEE
AEQALSSVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEDGLRHMVQAISACPT
TIAEMLEITDKVARDEMRIDELIDGLIDPNAAQAAEASAAETADDERAADDEVESEDGGD
DDDESDEDKEAAANAATLLQLKNDALVRFAIIRELHERKMAALATVGSQDRSYLDLQQQI
SGELLNIRFTAKAIERLCDSVRHMVEQVRGHERHILQLCVDRAGMPRQHFIKVFPGREID
LDWLKDEIGAGKNYAEGLMRVHPAVLEEQQKLIDLQTRIGIPLKELKDINRQMSTGEAKM
RRAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYAT
WWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGQEPDPATLAEKMEMPEE
KIRKIMKISKEPISMETPIGDDDDSHLGDFIEDQATLAPADAAMYSSLRDATGEVLDSLT
AREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSERLRSFLD
SDA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgaaaaaaccaaggattcgcgcaaggacagcccgaagggacgagcttccaga
gccaaagacaaaggagtgttggtagctgaaggtccccaagtggcgcctctcgacgccgag
gttcgccgcacccgcctcaagaccctgatcacgctcggcaaggagcgcggctatctcacc
tacgccgagatcagcgaccatctccctgatgatgtcgccgacgccgagcagatcgaaggc
atcatcgcgaccttcaacaacatgggcattcgcgtcttcgacgaggctccggctgccgaa
gacctgctgatgtcggacgcagtgccgagcagtgtcgacgaagacgtcgccgaagaagag
gccgaacaggcattgtcgtcggtcgactccgagttcggccgcacgaccgaccccgtgcgc
atgtacatgcgcgaaatgggcacggtcgaactgctcacccgcgaaggcgaaatcgagatc
gcgaagcggatcgaggacggcctgcgtcacatggtccaggccatttccgcgtgcccgacg
acgatcgccgaaatgctcgagatcaccgacaaggtcgctcgtgacgagatgcgcatcgac
gagctgatcgatgggctcatcgatcctaatgcggctcaggcggccgaagcgtcagcggcc
gagacggccgatgacgaaagggccgccgacgatgaagtcgagagcgaagatggcggcgac
gacgacgacgaaagcgacgaagacaaggaagctgcagcgaacgccgcaacgctgttgcag
ctgaagaacgacgcgctcgtgcgtttcgcgatcatccgcgaactgcacgagcggaagatg
gcggcgcttgcaacggtcggatctcaggaccgcagctatctcgatctgcagcaacagatt
tccggcgaactgctgaatatccgcttcaccgcgaaagcgatcgaacggctgtgcgactcg
gtgcgccacatggtcgaacaggtccgcggccacgagcgccacatcctgcaattgtgtgtc
gaccgcgccggcatgccacgccagcacttcatcaaggtgtttcccggccgcgagatcgat
ctcgactggctgaaggacgaaatcggcgccggcaagaactacgccgaaggcctgatgcgg
gtgcacccggcagtgctcgaggaacagcagaaactgatcgacttgcagacgcgcatcggc
atcccgctgaaggaactgaaggacatcaaccgccagatgtccaccggcgaagcgaagatg
cgccgcgcgaagcgcgaaatgaccgaggcgaacctgcgcctcgtgatttcgatcgccaag
aaatacaccaatcgcggcctgcaattcctcgacctgatccaggaaggcaacatcggcctg
atgaaggccgtggacaagttcgaataccgccgcggctacaaattctcgacctacgcgacg
tggtggatccggcaggccatcacccgctcgatcgcggaccaggcgcgcacgatccgcatc
cccgtgcacatgatcgagacgatcaacaagatgaaccggatcagccgccagatcttgcag
gaaaccggccaggaacccgatccggcgacgctcgccgagaagatggagatgcccgaggag
aagatccgcaagatcatgaaaatctccaaggaaccgatctcgatggaaacaccgatcggc
gacgacgacgattcgcatctgggcgacttcatcgaggatcaggccaccctcgcaccggcg
gacgccgcgatgtactcgagcctgcgcgacgccacgggcgaagtactcgactcgctcact
gcacgcgaagcgaaagtgctgcgcatgcgcttcggcatcgaaatgaacaccgatcacacc
ctcgaggaagtcggcaagcagttcgacgtcacccgcgaacgcatccgccagatcgaagcc
aaggcactgcgcaagctccgccacccgagccgttccgaacggctgcgcagtttcctcgac
agcgacgcctaa
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