Aromatoleum aromaticum: ebA4390
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Entry
ebA4390 CDS
T00222
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eba
Aromatoleum aromaticum
Pathway
eba03420
Nucleotide excision repair
eba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ebA4390 (uvrD)
03430 Mismatch repair
ebA4390 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA4390 (uvrD)
Enzymes [BR:
eba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ebA4390 (uvrD)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ebA4390 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ebA4390 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAI08614
UniProt:
Q5P250
LinkDB
All DBs
Position
2596903..2599125
Genome browser
AA seq
740 aa
AA seq
DB search
MSDLLANLNPEQLQAVTLPPQHALVLAGAGSGKTRVLTTRIAWLVQTGQVDPQGVLAVTF
TNKAAKELLARLSAMLPLSFNRSARGMWIGTFHGLCNRLLRAHHRDAGLPQLFQILDSGD
QLAAIKRLLKALNVDDEKFPPRELQHFINGQKEAGLRPHAVEAWDDYTRRRVELYIEYES
QCQRESVVDFAELLLRTYELLERNEPIRKHYQQRFRHILVDEFQDTNRLQYRWLKLLADT
GRDGAAKLFCVGDDDQSIYRFRGADVGNMRDFEREFHVANVIRLEQNYRSHGNILDAANA
IIRHNAGRLGKNLWTERGAGEPIRVFEACGDLDEARWIVDEIQSLVRDGMSRSGIALLYR
SNAQSRVLEHQLFSSGISYRVYGGLRFFERQEIKHALAYLRLIANPDDDTAFSRVVNFPT
RGIGARSIEALQDAARTWNSSLYAAVPHVAGKPGTVLAQFVRLVEDLRRDTAKLPLPELV
DHVLDVSGLRNHFRNEKEGQERLENLDELINAAANFVAEAGVQADAQDMAHALLADFLAH
ASLEAGEHQADAGSDAVQLMTVHSSKGLEFDAVFLSGLEEGLFPHENSIMETEGLEEERR
LMYVAVTRARQRLYLSFAQSRMLHGQTRYNLRSRFLEEIPEELTKWLSPPNPRTSAVRSG
FGGYYQPSRGGVVAKAPEQPVSRSRDLGGLRVGQLVTHAKFGQGVIVAAEGSGSDARLQI
NFGAAGVKWLMLAVAKLDPA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgctcgccaacctcaatcccgaacaactccaggccgttaccttgccgccg
caacacgcgctggtcctggccggcgccggttccggcaagacccgcgtcctgacgacgcgc
atcgcgtggctcgtgcagaccgggcaggtcgatccgcaaggtgtcctggccgtcactttc
acgaacaaggcggcaaaggaactgctcgcgcgcctgtccgcgatgctgccgctgagcttc
aaccggtcggcgcgcggcatgtggatcggcacgtttcacggactctgcaaccgtttgttg
cgcgctcaccaccgcgacgccggcctgccccaactgttccagatcctcgattcgggcgac
cagctcgccgcgatcaagcggctcctgaaggcgctgaacgtcgacgacgagaaattcccg
ccgcgcgaactgcagcatttcatcaacggccagaaagaagccgggctgcgtccccatgcc
gtcgaagcttgggacgattacacgcgccgccgggtcgagctgtacatcgagtacgagtcg
cagtgccagcgcgagtctgtcgtggattttgccgagctgctgttgcgcacttacgagctg
ctggagcgcaatgagccgatccgcaagcattaccagcagcgtttccgccacatcctcgtg
gacgaattccaggacacgaatcggctccagtaccgctggctgaagctgcttgccgacacg
ggtcgcgacggcgcagcgaagctgttctgcgtcggcgacgacgaccagtcgatctatcgt
ttccgcggcgccgacgtcggcaacatgcgcgatttcgagcgcgagtttcacgtcgccaac
gttatccgcctcgagcagaattaccgttcgcacggcaacatcctcgatgccgcgaacgcg
atcatccggcataacgccggccgtctcggcaagaatctgtggaccgaacgcggcgccggc
gagccgatccgcgtgttcgaggcctgcggcgacctggacgaggcgcgctggatcgtcgac
gaaatccagtcgctggtgcgcgacggcatgagccgttccggcatcgcgctgctgtatcgc
tcgaacgcgcagtcgcgcgtcctggagcaccagctcttttccagcggcatttcctaccgc
gtctacggcggcctgcgtttcttcgagcggcaggaaatcaagcatgcgctcgcgtacctg
cgcctgatcgccaatccggacgacgacaccgcgttcagccgcgtcgtcaattttccgacg
cgcggcattggcgcccgttcgatcgaggcgctgcaggatgcggcgcgcacatggaacagc
agcctgtacgcggcagtgccgcatgtggcggggaagccgggcaccgtgctggcccagttc
gtgcgcctggtcgaagacctgcggcgcgacaccgcaaagctgccgctgccggaactcgtc
gaccatgtgctcgatgtgtcgggcttgcgcaatcatttccgcaacgagaaggaaggccag
gagcggctcgaaaacctcgatgaactgatcaatgcagcagcgaatttcgttgccgaagca
ggcgtgcaggccgatgcgcaggacatggcgcatgcgctgctcgccgactttcttgcgcac
gcatcgctcgaggccggggagcaccaggccgatgccggcagcgacgcggtgcagttgatg
acggtgcattcatcgaaagggctggaattcgatgcggttttcctgtcgggcctcgaggaa
gggctgtttccgcacgagaacagcatcatggagacggaagggctggaggaggagcggcgg
ctgatgtatgtagcggtgacgcgggcacgccagcggctttacctgtcgttcgcgcagagt
cgcatgctgcacgggcagacgcgctacaacctgcgttcgcgctttctcgaggaaattccg
gaggaactcacgaagtggctgtcaccgccgaatccgcgcacgagcgcggtgcgcagcggg
ttcggcggctactatcagccgtcgcgcggcggcgtggtggcgaaggcgccggaacaaccg
gtttcgcgcagccgcgatctgggcggcttgcgtgtgggtcagctggtcacccacgccaag
ttcggccagggcgtgatcgtcgccgccgaaggcagcggctcggacgcccgactccagatc
aacttcggcgccgccggcgtcaagtggctgatgctcgcggtcgcgaagctcgatcccgcg
tga
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