Aromatoleum aromaticum: ebA5417
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Entry
ebA5417 CDS
T00222
Symbol
holB
Name
(GenBank) DNA-directed DNA polymerase III, delta subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
eba
Aromatoleum aromaticum
Pathway
eba03030
DNA replication
eba03430
Mismatch repair
eba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ebA5417 (holB)
03430 Mismatch repair
ebA5417 (holB)
03440 Homologous recombination
ebA5417 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eba03032
]
ebA5417 (holB)
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA5417 (holB)
Enzymes [BR:
eba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ebA5417 (holB)
DNA replication proteins [BR:
eba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ebA5417 (holB)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ebA5417 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
AAA_5
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAI09202
UniProt:
Q5P0G2
LinkDB
All DBs
Position
3220934..3221995
Genome browser
AA seq
353 aa
AA seq
DB search
MIHPWLQETWQRLVALGERLPHALLFVGPAGLGKRDLADALAARLLCATPRPDGCACDRC
TTCQLRRSGNHPDLFMIVPAADMEAGNGDESREGGERDIGSAKKKSTQIVIEQIRDLQQS
LSVTGHQSGRRVIVVDPAEAMNPYTANALLKLLEEPPAGCLFVLVSSAPRRLLPTIRSRC
QQWSFSQPATDVVGQWLGTQEAPAADLLALTGGMPLAAQRLAGQGAGALLARFVRDVAQL
PATDPLQLAGQWEAWLKSKEALAAGFGIVQLVEWMQRWVTDLASLRLGGRVRFFPREEEV
VRALAQRSNVAAVLNCYNEFARIRRVAQHPLNARLMLEDMLLRYARALAEPRS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatccacccgtggctgcaggaaacctggcagcggctcgtcgcgctcggtgaacgcctg
ccgcacgcgctgctgttcgtcgggccggcgggactcggcaagcgcgatctcgccgacgcg
ctggcggcgcggctgctgtgtgcgacgcctcgcccggacggctgcgcctgcgaccggtgc
acgacttgccaactgcgccgctcgggcaaccaccccgatctcttcatgatcgtgccggct
gccgacatggaagcgggcaacggcgacgagagcagggaaggcggggaacgcgacatcggg
tcggcaaagaagaagtccacgcagatcgtcatcgagcagatccgcgacctgcagcaatcg
ctgtcggtgaccgggcaccagagcggtcgacgcgtcatcgtcgtcgatccggccgaggca
atgaacccatataccgccaacgcgctactgaagctgctcgaagagcctcccgccgggtgc
ctgttcgtgctcgtgtcctcggctccgcgccgcctgctgccgacgatccgcagccgctgc
cagcagtggagcttttcgcagccggcgacggacgtggtcgggcagtggctcggcacgcag
gaagccccggcggcggacctcctcgccctgaccggcggcatgccgcttgcagcgcagcgg
ttggccgggcagggcgccggcgcgctgcttgcccgtttcgtgcgcgacgtggcgcagttg
cccgcaaccgatccgctccagcttgcgggtcagtgggaagcctggctgaaatcgaaggaa
gcgctcgcagccggtttcggtatcgtgcagctggtcgaatggatgcagcgctgggtcacc
gatcttgcttcgctgcgcctcggcggccgcgtacggttctttccccgcgaggaagaggtg
gtgcgcgcgctggcgcagcgctccaacgtggccgcagtgctgaactgctacaatgaattc
gcccggattcgccgggtcgcacagcatccgctgaatgcccgactgatgctcgaagacatg
ctgttgcgctatgcgcgcgcgctggcggaaccccgatcatga
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