Aromatoleum aromaticum: ebA5541
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Entry
ebA5541 CDS
T00222
Symbol
recO
Name
(GenBank) DNA repair protein recO (Recombination protein O)
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
eba
Aromatoleum aromaticum
Pathway
eba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ebA5541 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA5541 (recO)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ebA5541 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ebA5541 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
TPR_15
Motif
Other DBs
NCBI-ProteinID:
CAI09280
UniProt:
Q5P084
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All DBs
Position
3299517..3300236
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AA seq
239 aa
AA seq
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MSQKQRIDQQPAFVLHTYPWRETSLVVEIFSRDHGRVALVAKGARRPMSALRGVIMAFQP
LLMDWSGGGEVKTLVRAEWRGGQPLLTGRALMCGYYLNELLVRLTAREDAHPALFEAYAD
ALSQLGRGDVAPILRRFELTLLRELGYGIGLDLEGDSNRPVDPVQQYVYIIEKGPVRLAG
DDEGLPGVSGQTLLDMAHGDFSRAETLFQSKALLRLLINHYLGGQPLQSRRVLKELQEL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagaagcagcgcatcgaccagcaacctgcgttcgtcctgcacacttatccgtgg
cgcgaaaccagcttggtcgtcgagattttctcgcgcgaccacggccgagtcgcgctggtc
gccaagggcgcgcgccggccgatgtcagcgctgcgcggcgtgatcatggcgttccagccg
ctgctgatggactggtccggcgggggcgaggtcaagaccctggtgcgtgccgagtggcgc
ggcgggcagccgctgctcaccggtcgggcattgatgtgcggttactacctcaatgaactg
ctggtgcggctcaccgcacgcgaggatgcgcacccggcgctgttcgaggcctatgcggac
gcgctttcgcaactcggacgcggcgacgtggcaccgatcctgcggcgcttcgaactcacg
ctgctgcgcgaactcggttacggcatcggcctggacctcgaaggcgactcgaaccggccc
gttgatcccgtgcagcagtacgtctatataatcgagaaaggtccggtacggctcgccggc
gacgacgaaggcctgccgggcgtgagcggccagacgctgctcgacatggcgcacggggat
ttttcccgcgccgaaacccttttccagagcaaggcgctgctgcgcctgctgatcaaccac
tatctcggcggacagccgctgcagtcgcgccgggtgctgaaggagttgcaggaactgtga
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