Aromatoleum aromaticum: ebA6456
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Entry
ebA6456 CDS
T00222
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
eba
Aromatoleum aromaticum
Pathway
eba03030
DNA replication
eba03430
Mismatch repair
eba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ebA6456 (dnaQ)
03430 Mismatch repair
ebA6456 (dnaQ)
03440 Homologous recombination
ebA6456 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eba03032
]
ebA6456 (dnaQ)
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA6456 (dnaQ)
Enzymes [BR:
eba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ebA6456 (dnaQ)
DNA replication proteins [BR:
eba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ebA6456 (dnaQ)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ebA6456 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAI09817
UniProt:
Q5NYP7
LinkDB
All DBs
Position
complement(3830195..3830914)
Genome browser
AA seq
239 aa
AA seq
DB search
MRQIVLDTETTGLDWRNGDRVIEIGCVELLNRNLTGRHYHVYINPERGIDAEAIAVHGIT
EDFLADKPTFSAIAAEFEDFIRDAELIIHNASFDVGFLNHELSRLGRGKLDSLCAGVIDT
LKMAKEQNPGKKASLDALCDRHQIDNASRTLHGALLDAELLAEVYLAMTRGQESLIMVLE
EPVPGSAEAGGVLVDRPPLKVLRASGEELAEHERVLQDIAKGTKGTCLWIAPEPEAAAA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagacagatcgtcctcgacacggaaaccaccggactcgactggcgcaacggcgaccgc
gtcatcgaaatcggctgcgtcgagttgctgaaccgcaacctgaccgggcggcattaccac
gtctatatcaacccggagcgcggcatcgatgccgaggcgatcgcggtgcacggcattacc
gaggatttccttgccgacaagccgacgttcagcgccatcgcggccgagttcgaggatttc
atccgcgacgccgaactgatcatccataacgcgagcttcgacgtcggcttcctgaaccac
gagctgtcgcggctcgggcgcggaaagctcgacagcctttgcgcgggtgtcatcgatacg
ctgaagatggcgaaggagcagaacccgggcaagaaggcgtcgctcgacgcgctgtgcgac
cggcaccagatcgacaacgcgtcccggacgctgcacggcgcactgctcgacgcggagctg
ctcgccgaagtctacctggcgatgacgcgcggccaggagagcctgatcatggtgctcgaa
gagcctgtgccgggcagcgccgaagctggaggcgtgctcgtcgatcggcctccgctgaaa
gtgctccgcgcgagcggcgaggagctggccgaacatgagcgggtgctgcaggacatcgcg
aaagggacgaaaggcacctgcctgtggatcgcgcccgaacctgaagcggccgcggcctga
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