Aromatoleum aromaticum: ebA6818
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Entry
ebA6818 CDS
T00222
Symbol
ybbB
Name
(GenBank) 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
eba
Aromatoleum aromaticum
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eba03016
]
ebA6818 (ybbB)
Enzymes [BR:
eba01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
ebA6818 (ybbB)
Transfer RNA biogenesis [BR:
eba03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ebA6818 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
CAI10022
UniProt:
Q5NY42
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All DBs
Position
4046003..4047097
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AA seq
364 aa
AA seq
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MKKGIATVAQLSAFDEVIDARSPAEFDEDRIPGAISCPVLDNAQRVVVGTIYKQQSAFEA
RRIGAAMVAENIAHHLKTRFHDKPKNWRPLVYCWRGGQRSGAFVTWLRLIGWDACQLEGG
YKTWRRMVVAELEELPARFDLRVVCGATGSAKTRVLDALAKLGAQVLDLEHLAAHKGSVL
GALPDRPQPTQKSFETELFRTLHALDPARPVFVEAESRKIGRIQVPEALIRQMRASPCVA
IEASREARLEFLVRDYAYLGDDIADLQKKIDFLKGLQSNETLERWKTLAAAHDLPTLFAE
FIELHYDPLYHRSQNRNFTRFPSAPIFTSDDLSPAGIEALARRILAAAAAQPEALTRVAD
PATP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcatcgcgaccgtagcacagctgtccgcctttgacgaggtcatcgacgcc
cgcagcccggccgaattcgacgaagaccgcattcccggcgcgatcagctgcccggtgctc
gacaacgcccagcgtgtcgtcgtcggcacgatctacaagcaacagtccgcgttcgaggcg
cggcgcatcggcgcggcgatggtcgccgagaacatcgcgcatcacctgaaaacccgcttc
cacgataaaccgaagaactggcggccgctggtgtattgctggcgcggcggccagcgcagc
ggcgcgttcgtcacctggctgcggctgatcggctgggatgcgtgccagctcgaaggcggc
tacaagacgtggcgccggatggtggtcgcggaactcgaagaactcccggcgcgcttcgac
ctgcgcgtcgtgtgcggggccacgggcagcgccaagacgcgcgtcctcgacgcgctggca
aagctcggcgcgcaggtgctcgatctcgagcatctcgccgcgcacaagggctccgtgctc
ggcgcgctgccggaccgtccgcagccgacgcagaaatcgttcgaaaccgaactgttccgc
accctgcacgcgctcgacccggcgcggccggtgttcgtcgaggccgaaagccgcaagatc
ggccgcatccaggtgcccgaggcgctgatccggcagatgcgcgcgagcccttgcgtcgcg
atcgaagccagccgcgaagcgcgcctcgagttcctcgtgcgcgactacgcgtacctcggc
gacgacatcgccgacctgcagaagaaaatcgacttcctcaagggcctgcagagcaacgag
acgctggaacgctggaagacccttgccgcggcgcacgacctgccgacgcttttcgccgag
ttcatcgagctgcactacgatccgctctaccaccgctcgcagaacaggaatttcacccgc
tttccgagcgcgccgatcttcacgagcgacgacctgtcgccggccgggatcgaggcgctg
gcacggcgcatactcgctgccgccgcggcgcagcccgaagcgcttactcgggtggccgat
ccggcaacaccgtga
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