Aromatoleum aromaticum: ebB116
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Entry
ebB116 CDS
T00222
Symbol
hupA
Name
(GenBank) DNA-binding protein hu-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
eba
Aromatoleum aromaticum
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eba03032
]
ebB116 (hupA)
03036 Chromosome and associated proteins [BR:
eba03036
]
ebB116 (hupA)
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebB116 (hupA)
DNA replication proteins [BR:
eba03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ebB116 (hupA)
Chromosome and associated proteins [BR:
eba03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ebB116 (hupA)
DNA repair and recombination proteins [BR:
eba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ebB116 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HTH_Tnp_4
HU-CCDC81_euk_2
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
CAI08137
UniProt:
Q5P3H7
LinkDB
All DBs
Position
2105536..2105814
Genome browser
AA seq
92 aa
AA seq
DB search
MNKGEFVEALADRLDVSRAQADRALSTVLDIIVERMAAGEKVAFTGFGSFEVSERAERTG
RNPQTGASIKIAASRVPKFSAGATLKTAINSK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtgaattcgtcgaggccctggccgaccgtctggatgtttcccgggcacag
gccgaccgggccctgtcgaccgtgctggatatcatcgtcgagcgcatggctgccggcgaa
aaagttgccttcacaggcttcggctctttcgaagtgtccgagcgcgccgagcgcaccggg
cggaatccgcagaccggcgcctcgatcaagatcgccgcgtcgcgcgtgccgaaattctcc
gccggcgccacgctgaagaccgcaatcaacagcaagtaa
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