Enterobacteriaceae bacterium bta3-1: F652_2121
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Entry
F652_2121 CDS
T09572
Symbol
sbcC
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ebb
Enterobacteriaceae bacterium bta3-1
Brite
KEGG Orthology (KO) [BR:
ebb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebb03400
]
F652_2121 (sbcC)
DNA repair and recombination proteins [BR:
ebb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F652_2121 (sbcC)
Archaeal homologous recombinant proteins
F652_2121 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
nSTAND3
TsaE
AAA_21
cobW
AAA_22
GTP_EFTU
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AJR00111
LinkDB
All DBs
Position
2334808..2338494
Genome browser
AA seq
1228 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTREDFANNGLFAITGPTGAGKTTLLDALCLALYHQTPR
LKVSPTQNELMTRGTAESLAEVEFEVKGTGYRAFWSQRRANNKPEGNLQAPKVELAFIAD
GEIITDKIQTKLHKIAEITGLDFGRFTKSMMLSQGQFAAFLNADPAERAELLEELTGTEI
YGQLSEQIFQRFKQAKIDLDALHERAAGVELLSEEALAQLAERLAQLQNEEQHQETARKT
LTSELQWLQKHQELTQNRELCNQRTAHAQQQWLDAQPELLRLERSEPAEKLRPLLQSLRQ
TRSDLSLLLKSQQQRQEQQQRLASQLEPLQTASANALTAKQQQQQIRTTTETLINQHVVP
LDARLAQTHDVLAQQRQKLTQIDAEKQQHNTALNQLREQLQKQQRELSQLQQILMQTAPH
AEWNNHLGRWKSQFEQSAELQQTQSDLQKRIANAEKVLTADAEKLTLQQQAGASLNQRLI
EQQKRCAEAEEHYQKAQQSQNLQQLEAMREKLHSGQPSRQILLQTSPLFEKAAQRRQQLQ
QQTVQRSQELQTLEQLLAAKRLAYKEKRQHLIDLEKQIDLQRRVLGLEQERARLIAGDPC
PLCGSLEHPAVENYQAPILSDSEQRRDALRQEVETLSREGSELGERQKLLLQTQSQQQQE
TQTVDQEITQYQRRWEQATATLELKIAIEDRTALENYLADIVQQEDSIQKSIRQRETLNK
TWQQAKDELNKIQQEASHTIQQINLLEQSIQTQRRQLAEWREEYHKQTSHQQQRQERLAT
ELLELHLVAPLGGEENEWLAAREQEFSLWQQRQLHSQKLTLENTRLSADEQNLSQTLATL
EKQWLTQQQLCAEQEKLLTQMQAERQTLLDGRSVDDVRRSLTQAEQLAENQLQQAQNAES
AVRQQLDTLSGELSSAQQQLSQLEQRLSQQQTDFEQALSVSQFSDEENLLAALLDESEHQ
RLTTLREHSKNQLSQAQAFLQQADAALAEWVTQRPATLADDSTLEHLNQQLTALAEQLRD
NSVQQGQIQQQIRSDAERKQGQQSLFARIEQSRQEYEDWSYLNQLIGSSSGDKFRKFAQG
LTLDHLVYLANQQLSRLHGRYLLQRKTSDALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDTLNASGKMIGVISHVEAMK
ERIPVQIKVKKVNGLGISRLETQYAVGE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctacgcctaaaaaatatcaactcgctcaaaggtgaatggaaaatc
gacttcacgcgcgaggattttgctaacaacggtctttttgctattaccggcccaaccggg
gcggggaaaaccacgctgcttgatgcgctatgtttagcgctttatcaccaaacgccgcgt
ttgaaagtttcgcctacgcaaaatgagcttatgacccggggtaccgcagagtctttggcc
gaggttgaattcgaagtcaaaggcaccggataccgtgcattctggagccagcgccgcgcc
aacaacaaaccagaaggcaatctacaagcgccgaaggtagagctggcatttatcgccgac
ggcgaaattatcaccgacaaaattcaaaccaagctgcacaagattgccgaaatcaccggc
ttggattttggccgttttaccaaatcgatgatgctgtcgcaggggcagtttgccgcgttc
ctcaatgccgatcccgccgagcgcgctgagctactggaagagctgaccggaaccgaaatt
tatgggcagctttccgaacaaattttccagcgtttcaaacaggccaaaatcgatctcgat
gcgctacacgaacgtgccgcgggcgtagaactgctgagcgaagaggctcttgcccagctc
gccgaacgcttggcacagctacaaaacgaagagcaacaccaagagacagcgcgtaaaacg
ctgacgtctgaacttcaatggttgcaaaaacaccaagagctgacgcaaaaccgcgagcta
tgcaatcaacgtacggcgcatgcgcagcaacaatggttggatgcacagcctgagcttttg
cgcttagagcgcagcgaacctgcagagaagctgcgtccactgttacaaagcctacgacag
acccgcagcgatttatcacttctgctcaaaagccaacaacagcgccaagaacagcaacag
cggctagcctcgcagttggaaccgctccaaaccgcgtcggccaatgcgttaacagcaaag
cagcaacagcagcagatccgcacaacaacggaaacgctgattaaccagcacgttgtcccg
ctcgatgctcgtttggcacaaacccacgacgtactcgcacagcagcggcaaaagctgacg
caaatcgacgcggaaaaacagcagcataataccgcgctcaatcagttgcgtgagcaactg
caaaaacagcaacgagagctcagccagctacaacaaattctgatgcaaaccgctccgcat
gcagaatggaataaccatcttggccgttggaaaagccagttcgagcaatctgccgaatta
cagcagacgcagagcgatctgcaaaaacgtatcgccaacgccgaaaaagtgcttaccgcc
gacgctgaaaagctcacgcttcagcaacaggccggagcatcgctcaaccaacgtttaatt
gaacagcaaaaacgttgcgccgaagccgaagagcactatcaaaaagcccagcagagccaa
aacctacagcagttggaggcgatgcgtgaaaaactgcatagtggacaaccctcacgccag
atactcctgcaaaccagcccgctgtttgaaaaagcggctcagcggcggcaacagctccaa
cagcaaaccgttcagcgaagccaagagttgcaaacgcttgaacagctgttagcggccaaa
cgattagcttataaggaaaaacgtcagcatctcatcgacttggaaaaacagatcgatcta
cagagacgcgtgctcggtcttgagcaagagcgagcacgcctgatagctggcgatccttgc
ccactctgcggatcgttggagcatccggcagttgaaaactatcaagcgccgatcctttct
gacagcgagcagcgacgtgacgccctacgccaagaggtagaaacccttagccgcgagggc
agtgaacttggagaacgacaaaaactgttgcttcaaactcaaagtcagcaacagcaagaa
actcaaaccgtcgaccaagaaattacgcagtaccaacgccgctgggaacaggccactgct
acgcttgagctcaaaatagcgattgaagatcgcaccgcgttagaaaactatctggcggat
attgttcaacaagaagacagcattcagaaaagcattcgccaacgagaaacgctgaataaa
acgtggcagcaggctaaagatgagctgaataaaattcagcaagaggcgagccatacgatc
cagcaaatcaacctgctggaacaaagtattcaaacccaacgtcgacagttggcagagtgg
cgcgaggaataccacaaacaaacgtcacaccagcaacagcgccaagagcgtttagcaaca
gagttgctggagctgcatttagttgcgccactcgggggtgaagaaaatgaatggctggct
gcccgtgaacaagagttctccctttggcaacagcgtcagcttcacagccaaaagctgacg
ttggaaaacacacgtctcagcgcagatgaacaaaacctgagccaaacattagcaacgctg
gaaaaacagtggctaacccagcaacagctttgtgcggaacaagaaaagctgctcacccag
atgcaggccgaacgccaaacgctgcttgacggtcgcagcgtagatgacgtgcgccgctca
ttgactcaggctgagcagctggctgaaaaccaattacagcaggcccagaacgccgaaagc
gcggttcgccagcagttagatacgctgagcggcgagcttagcagcgcccagcaacagcta
tcacagttggaacaacggttaagccaacagcaaactgatttcgaacaggctctgtctgtc
agccaattcagcgatgaagagaatctgctcgctgcgctgttagatgagagtgagcatcaa
cgcctaacgacgctacgcgaacacagcaaaaatcagctttcgcaggcacaggcgttttta
caacaggctgacgccgcgctagctgaatgggtcactcagcgccctgcgacgttagcggac
gacagcacgctagaacacctaaaccaacaattaacggcgcttgctgagcaactgcgtgac
aatagcgttcagcaaggacaaattcagcagcaaatccgcagcgacgccgaacgaaaacag
gggcagcaaagcctatttgctcgtattgagcaaagccgtcaggaatacgaagactggagc
tatctcaaccagcttatcggttctagcagcggagataaattccgcaaattcgcacaggga
ctgacgctggatcatctggtctatttagccaatcaacaactgtctcgtttacatggacgc
tatctactgcagcgtaaaaccagcgacgcattagaactggaagtggttgatacctggcaa
gctgatgcagtacgcgatacccgaaccctctccggcggtgaaagcttcttggtgagctta
gcgcttgcgctggcgctgtcggatctggtgagtcataaaaccagcattgattctctattc
ctcgatgaaggctttggcacattggatgcagaaaccctcgacaccgcgctcgacgcactc
gacacgctcaatgcctccggcaaaatgatcggcgtaatcagccatgtcgaagccatgaaa
gaacgaataccggtgcagataaaagtgaaaaaggtgaatggattagggataagccggtta
gaaacgcagtatgcggtaggagagtaa
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integrated database retrieval system
