Enterobacteriaceae bacterium bta3-1: F652_3465
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Entry
F652_3465 CDS
T09572
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ebb
Enterobacteriaceae bacterium bta3-1
Pathway
ebb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F652_3465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebb03400
]
F652_3465
Enzymes [BR:
ebb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
F652_3465
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
F652_3465
DNA repair and recombination proteins [BR:
ebb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F652_3465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AJR01454
LinkDB
All DBs
Position
3866833..3867642
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGNSIEHLVVRQPKLRWPVSDELLRLSDKPVLSVQRRAKYLL
IELADGWIIVHLGMSGSVRILPADEPPQKHDHVDMILSSGMMLRYTDPRRFGAWLWCKDL
DSSNVLAHLGPEPLSDEFNGDYLFRKSRSKKTAVKAWLMDNKVVVGVGNIYASESLFTAR
ISPDRPAGDLTQADAEVLVATIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRA
GEACRVCGEKILSGKHGQRTTFFCPRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaagtcgaaactagccgtcgcgggattgagccctatttagtcggt
aattcaattgaacatcttgtggtgcgccaacctaagcttcgttggccggtttctgatgag
ttacttcgattaagtgacaagcctgtgcttagtgtgcagcgtcgtgctaagtatttgctg
attgaactagcagatggatggattattgttcatctcggtatgtctggtagcgtacgtatc
ctgcccgcagatgagcctccccaaaagcatgaccacgtcgatatgattctatcgagcggt
atgatgctgcgctataccgacccacgccgttttggcgcatggctttggtgtaaggattta
gattcatccaatgtcctcgcccatctcggccctgagccgctcagcgatgagtttaacggt
gattacctgttccgtaagtcgcgtagtaagaaaaccgccgtgaaggcgtggctaatggat
aataaagtggttgtcggggtagggaacatttacgccagtgaatcattatttactgcgcgt
atcagccccgatagacccgccggtgacttgacgcaagcagatgccgaagtattagtcgcg
acaatcaaggcggtgctgctgcgttctattgagcagggcggtacaacgctaaaagacttt
ttgcagtcagatggaaaacctgggtattttgcgcaggaactacaagtttatggccgcgct
ggagaagcctgcagggtatgcggcgagaaaatattgagtggaaaacatgggcagcgtacg
acgttcttttgtcctcgctgccagaaataa
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