Enterobacteriaceae bacterium bta3-1: F652_3549
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Entry
F652_3549 CDS
T09572
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ebb
Enterobacteriaceae bacterium bta3-1
Pathway
ebb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F652_3549 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebb03019
]
F652_3549 (rhlB)
Enzymes [BR:
ebb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F652_3549 (rhlB)
Messenger RNA biogenesis [BR:
ebb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F652_3549 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
SwaI-like
Motif
Other DBs
NCBI-ProteinID:
AJR01538
LinkDB
All DBs
Position
complement(3966364..3967653)
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AA seq
429 aa
AA seq
DB search
MSKTHLTEQKFADFALHPTVVKALESKGFHNCTPIQALALPLTVNGRDVAGQAQTGTGKT
LAFLASTFHYLLTHPVAENRKTNQPRALIMAPTRELAVQIHSDAEALAHETGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQGHIDLGCIQVVVLDEADRMFDLGFIKDIR
WLFRRMPATNQRLNMMFSATLSYRVRELAFEHMNNAEYIEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGNLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGYSITLA
CEEYVLNLPAIEAYIEHSIPVSKYNSEALLTDLPAPKRLTRPRSNNGQRRSSGPRRNNGS
MRQSRKRTS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaactgaacagaagttcgccgacttcgccctgcacccaacggtg
gtcaaagcccttgaatctaaaggctttcataactgcacgcctattcaggcactcgcatta
cccctgacagtgaatgggcgtgatgtagcaggtcaggcgcaaacaggcaccggcaagacg
ctggcttttttagcgtcaactttccattatttactcactcaccctgtcgcagagaaccgt
aaaaccaatcagccaagagcgctgattatggctccgacacgtgaattagccgtccaaatt
cactctgatgccgaggcactcgcgcacgaaactggtctgaaacttggtttggcatacggt
ggcgatggctacgataagcagctgaaagtgctcgaaagtggtgttgatattctgattggc
actacgggtcgcttgatcgactatgctaagcaaggccatatcgacctcggctgtattcag
gttgtggttcttgatgaagccgaccgcatgttcgacttaggctttattaaagatatccgc
tggctattccgtcgaatgcctgcgaccaatcagcgcttaaatatgatgttctccgctaca
ttatcttatcgtgtacgcgaacttgccttcgaacatatgaacaacgctgaatatattgaa
gtggaaccagaacaaaaaacgggtcatcgcattaaagaagagctgttctacccttctaac
gaagaaaaaatgcgtttattacagacgctgatcgaagaagagtggccagatcgctgcatt
atttttgccaataccaagcaccgttgcgaagatatctggggtcatttagccgcagatgga
catcgtgtaggcctgctgaccggcgatgtcgctcagaaaaaacgtctgcgtattctggat
gacttcaccaaaggcaatctggatatcttagttgcaaccgacgtcgctgcccgtggatta
catatcccactggtgactcacgtattcaactacgatttacctgacgattgtgaagactac
gttcaccgtatcggccgaactggacgtgcaggcgaaagtggctattccatcacactggct
tgtgaagaatatgtcctcaatctgccagcaattgaggcctatattgagcactcaatccca
gtaagcaagtacaacagcgaagcgctgctgactgatttacctgcaccgaagcgattaact
cgccctcggagtaacaacggccaacgccgtagttcaggtccgcgccgtaataacggttcg
atgcgtcaaagtcgtaaacgtacgagttaa
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