Enterobacteriaceae bacterium bta3-1: F652_3583
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Entry
F652_3583 CDS
T09572
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ebb
Enterobacteriaceae bacterium bta3-1
Pathway
ebb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F652_3583 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebb03019
]
F652_3583 (recQ)
03400 DNA repair and recombination proteins [BR:
ebb03400
]
F652_3583 (recQ)
Enzymes [BR:
ebb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F652_3583 (recQ)
Messenger RNA biogenesis [BR:
ebb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F652_3583 (recQ)
DNA repair and recombination proteins [BR:
ebb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F652_3583 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AJR01572
LinkDB
All DBs
Position
4003792..4005630
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AA seq
612 aa
AA seq
DB search
MATAAVINAEMLAEQVLRDTFGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIP
ALVMEGLTLVVSPLISLMKDQVDQLQANGVSAACLNSTQNREQQQEVYAGCRSGAIKLLY
IAPERLMMDNFLDQLPHWNPALLAVDEAHCISQWGHDFRPEYSALGLIKQRFPDIPVIAL
TATADDATRNDIERLLSLNDPLVQVSSFDRPNIRYTLIEKFKPLDQLIRFVQEQRGKSGI
IYCNSRAKVEDTTARLQSRGFSVGAYHAGLDHEHRSSVQDAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIEAYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPEGQQ
KEIERHKLNAMNAFAEAQTCRRLVLLNYFGEGRQESCGNCDICLDPPKRYDGLEDAQKAL
SAIARVGQRFGIGYVVEILRGANNTRIREFGHDKLKVYGLGRDHTTEHWVSVLRQLIHLG
LVTQNIAMHSALQLTESARPVLRGEVPLQLAVPRVINLKSRSSSSHASKNYGGNYDRKLF
AKLRKLRKAIADEENIPPYVVFNDATLLEMAEQMPIRASELLSINGVGQRKLDRFGAPFM
TLIREHVDGDDE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacggcagcagttatcaacgcagaaatgctggcagaacaggttttgcgcgatacg
ttcgggtatcagcaattccgtcctggacagcaaacgattatcaatgctgcgatcgctggc
cgggattgtctggttgtgatgccaaccggaggcggcaagtctctgtgttatcagattcct
gcgttagtcatggaaggtttaacgctggtggtttcgccgttgatttctctgatgaaagat
caggtcgatcagctacaggccaacggtgtgagcgctgcgtgtcttaactccacgcaaaac
cgtgaacagcaacaggaagtttacgctgggtgtcgtagcggagcgataaagctgctgtat
atcgcgccagagcggttgatgatggataacttcctcgatcagctcccccactggaacccc
gcgctgcttgcggtcgatgaagcgcattgtatttcacaatggggacatgatttccgccct
gaatatagcgcgttaggcctgataaaacagcgtttccctgatattccggttatcgcgtta
accgcgaccgccgacgatgcaacgcgtaatgatattgagcgtttgctatcgctcaacgat
cctctggtgcaggtcagcagctttgatcgaccaaatattcgttacaccctgattgaaaaa
ttcaaaccgctcgatcaactgatccgctttgttcaagaacagcgtggaaaatccggcatt
atctactgtaacagccgtgcgaaagtggaagacaccacagcccgtctgcaaagccgtggt
ttcagcgtcggagcctaccatgcagggctcgatcacgagcaccgctcttcggtgcaagac
gcttttcagcgtgatgacttgcagattgtggtggcgacggtggcgtttggcatggggatc
aacaagcctaacgtgcgcttcgtggttcattttgatattccacgtaatattgaagcttac
tatcaggaaaccggtcgtgctgggcgcgatggtttacctgctgaagccgtgttgctttac
gatcctgccgatatggcgtggttacgtcgctgtttagaagagaaacctgaagggcagcaa
aaagagattgagcgccataaactcaatgcgatgaatgcgtttgccgaagcacagacctgc
cgtcgcttagttctgctgaattactttggggaagggcgacaggaatcgtgcggaaactgt
gatatttgtctcgatccacccaagcgttacgatggtttggaagatgcgcaaaaagcgctg
tcggccattgcccgcgttggacagcgatttggtattggttacgtggtggaaattttgcgc
ggtgcaaacaatacccgtatacgcgagtttgggcatgacaaactcaaggtttatgggcta
gggcgcgatcacaccaccgagcactgggttagcgtattgcgtcagctcattcatttagga
ttagtgacacaaaatattgctatgcattccgcgctacagctaacggagtctgctcgtccc
gtgctgcgcggcgaagtacctttgcagctagcagttccgcgtgtgataaatctcaaatca
cgcagcagcagtagccatgccagtaaaaattacggcggaaactatgaccgcaagctgttt
gccaaactgcgtaagctacgcaaagccattgccgatgaggaaaatattccaccatacgtg
gttttcaacgatgcaacattgttagaaatggcagaacagatgccgattcgcgccagcgaa
ttgctgagtattaacggtgtgggacagcgtaaactggatcgtttcggtgcaccgtttatg
acgctgattcgagagcacgtcgacggcgatgatgagtag
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