Enterobacteriaceae bacterium bta3-1: F652_3929
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Entry
F652_3929 CDS
T09572
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ebb
Enterobacteriaceae bacterium bta3-1
Pathway
ebb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F652_3929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebb03019
]
F652_3929
03016 Transfer RNA biogenesis [BR:
ebb03016
]
F652_3929
Enzymes [BR:
ebb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F652_3929
Messenger RNA biogenesis [BR:
ebb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F652_3929
Transfer RNA biogenesis [BR:
ebb03016
]
Prokaryotic type
tRNA degradation factors
F652_3929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
DUF4172
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AJR01918
LinkDB
All DBs
Position
4404886..4407000
Genome browser
AA seq
704 aa
AA seq
DB search
MLNPIVRKFQYGQNTVTLETGMMARQATAAVMVTMDDTAVFVTVVGAKKAKEGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPGEGETLIARLIDRPIRPLFPEGFLNEVQVVATVVSV
NPQVSPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTDELQESKLDLVVA
GTEGAVLMVESEAQLLSEDQMLGAVVFGHDQQQVVIENIKALAAEAGKPRWEWTAPAVNE
ALHARVAALAEARIGDAYHITEKQARYAQIDQIKADVIAALQAEDESLNAGEIADVLGSL
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDGLTGEQTDRFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPKQDE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDENFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTVKIAAT
DNEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEASAPEQAAAPTAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatcctatcgttcgcaaattccagtacggtcagaataccgtaacgttggaaact
ggcatgatggctcgccaagccactgctgcagtcatggttaccatggacgacaccgcggta
ttcgttaccgttgttggcgctaaaaaagctaaagaaggccagagcttcttccctctgacc
gttaactatcaggagcgtacctacgctgctggtcgtttcccaggtggtttcttccgtcgt
gaaggccgtcctggtgaaggcgaaactctgattgcgcgtctgattgaccgcccaattcgc
ccactgttcccagaaggcttcctgaacgaagttcaggttgttgctaccgttgtttccgta
aacccgcaggttagcccagacatcgttgcgatgatcggtgcttctgctgccctgagcctg
tccggtattccgttcaatggcccaatcggtgcagctcgcgttggttacatcaacgaccag
tatgtgctgaacccaacgaccgatgagctgcaagaaagcaagctggatctggttgttgca
ggtaccgaaggcgcagtgctgatggttgaatccgaagctcagttactgagcgaagaccag
atgctgggtgccgtagtattcggtcacgatcagcagcaggttgttattgaaaacatcaag
gcgctggctgcagaagcgggcaaacctcgttgggaatggactgcacctgcggttaacgaa
gcactgcatgctcgcgttgctgcgctggctgaagctcgtatcggtgatgcataccacatc
actgaaaaacaggctcgctacgctcagattgaccagattaaagctgacgttatcgctgcc
ctgcaggctgaagacgaatctctgaacgctggcgaaatcgcagacgttctggggtcactg
gagaaaaatgtcgtacgtagccgtgtgctgcgtggcgagccgcgtattgatggccgtgaa
aaagacatgatccgtggcctcgatgtgcgtaccggtgtcctgccgcgtacccatggttct
gcactgttcacccgtggtgaaactcaggctctggtgaccgcaactctgggtacagaacgt
gatgctcagaacattgatggcttaactggcgagcagactgaccgcttcctgctacactat
aacttccctccgtattccgtaggggaaaccggcatgatgggttcacctaagcgtcgtgaa
attggtcacggtcgtttggcgaagcgcggcgtgttggctgtaatgcctaagcaagacgaa
ttcccgtacactgttcgtgtggtttctgaaatcaccgaatctaacggttcttcttcaatg
gcttccgtttgtggtgcttctttagcactgatggacgcaggtgtcccgatcaaagctgcc
gttgccggtatcgcgatgggtctagttaaagaagacgaaaactttgtcgtattgtctgac
attctgggtgacgaagatcacctgggcgacatggacttcaaagttgcgggtagccgcgaa
ggtatcactgctctgcagatggatattaagattgaaggcatcacccgcgaaattatgcag
gtggctctgaatcaggctaagggtgcgcgtttgcacattctgggtgtgatggaacaggcg
atcaacgcgccacgtggtgatatctctgaattcgctccacgtatccataccatcaagatc
aatcctgagaagatcaaagatgttatcggtaagggcggttccgttattcgtgcactgact
gacgaaacgggcactaccattgaaatcgaagatgacggtactgttaaaatcgcagcaacc
gacaacgaaaaagcgaaacatgctattcgtcgtatcgaagaaatcactgctgaaatcgaa
gttggccgtatctatcagggtaaagtaacccgtatcgttgatttcggtgcattcgttgct
atcggtggcggtaaagaaggtctggttcatatttctcagatcgctgacaagcgcgttgag
aaagtgactgactatctgcagatgggtcaggaagttcctgttaaggttctggaagttgac
cgtcagggtcgcgtccgcttgagcatcaaagaagcaagcgcaccagaacaagcagctgct
ccaactgctgaataa
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