Enterobacteriaceae bacterium bta3-1: F652_437
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Entry
F652_437 CDS
T09572
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ebb
Enterobacteriaceae bacterium bta3-1
Pathway
ebb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ebb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F652_437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebb03400
]
F652_437
DNA repair and recombination proteins [BR:
ebb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F652_437
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F652_437
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AJQ98427
LinkDB
All DBs
Position
494357..496375
Genome browser
AA seq
672 aa
AA seq
DB search
MSKTFKLHSAFKPDGDQPEAIRRLEAGLENGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVMAPNKTLAAQLYGEMKQFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSVNEHIE
QMRLSATKALLERKDVIVVASVSAIYGLGDPDAYLKMMLHLTRGMIIDQRAILRRLSELQ
YARNDQAFQRGTFRVRGEVIDIFPAESEDEALRVELFDEEVERLSLFDPLTGQLIQEVQR
FTVYPKTHYVTPRERILQAMEEIKVDLAERRQVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRKPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGNYELEKSGGDIVDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRIREAINERVLVTTLTKRMAEDLTEYLDEHGVRVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITNSMEKAIGETERRRAKQQAYNLEHGITPQALNKKVSDILQLG
EASSRSKGKHGRSSKAAESSAAYQALSPKQIEQRIRDLEAQMYKHAQNLEFEEAASLRDD
IQALRDQFIAMS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacgttcaagttgcattctgcattcaagccagacggcgatcagccagaggct
attcgtcgtttagaggctggtttagagaacggcttggcacatcagacgctgttgggggtt
acgggatcgggtaagacctttacgattgccaacgtgattgccgatcttaaccgtccaacc
atggttatggcgccgaacaaaaccctcgccgcacagctctacggcgaaatgaagcagttt
tttcctgaaaatgccgttgagtattttgtctcttattacgattactaccagcctgaagcc
tatgtgccgagttctgataccttcattgagaaagactcctcggtaaacgaacatattgag
caaatgcgcctttcagccacgaaagcgctgcttgaacgtaaagacgtcattgtggtggct
tctgtttctgccatctatggtttgggcgatcctgatgcctacctcaagatgatgttgcat
ctaacgcgtgggatgattatcgatcagcgcgctattttgcgtcgtttatcagaactgcaa
tatgcgcgtaatgaccaagcgtttcagcgtggtacgttccgtgttcgtggggaagtgatc
gacattttccccgcagagtcggaagacgaggcgctgcgcgttgaattgtttgatgaagaa
gtcgagcggctatcgctatttgaccctttaaccggccaactgatacaagaagttcagcgc
tttacggtttatccaaagacgcattacgttacgccgcgcgagcgtatcttgcaggcaatg
gaagagattaaggtcgatttagcagagcgcaggcaggtgctgttggcgaacaataaactg
ctggaagagcagcgtttgacgcagagaacccaatttgacctcgaaatgatgaacgagttg
ggctactgctctggtatcgaaaactattcccgctatctttcgggtcgtaagcctggcgaa
gcgcctcctacgctgtttgattatttgccagccgatggtttgctggtcatcgatgagtcc
cacgtaaccattccgcaaattggtgggatgtatcgaggtgaccgagcgcgtaaagaaacg
ctggtggaatatggtttccgcttaccgtccgccctagataaccggccgatgcgatttgaa
gagtttgaggcgctagcaccgcaaactatttatgtatcggcaacgccgggtaattatgag
ctggaaaaatccggtggcgatattgttgatcaggtcgttcgtccaacgggtctattggat
ccgttaattgaagttcgcccagtagcaacacaggtggatgatttactgtctgagattcga
attcgtgaagcgattaacgagcgtgtgcttgtgactacgctgactaagcgtatggctgag
gatttaactgagtatctggatgaacacggtgtacgagttcgctatctgcactctgatatt
gataccgtggagcgtgtggagattattcgcgatctacgccttggcgaatttgacgttttg
gttgggatcaacctgttacgagaagggctcgacatgcctgaagtctcgctggtggctatt
ttagacgcggataaagaaggtttcctgcgttctgaacgttcgttgattcagactattggt
cgagcagcgcgtaaccttaatggtaaggcgattttgtatggtgaccgcattaccaactcg
atggaaaaagcgattggcgaaaccgaacgtcgccgagcgaaacagcaagcctataacctt
gagcacggtattacgcctcaggcgctgaataagaaagtctctgacattctgcaactggga
gaagcatcttcacgtagcaaaggaaaacatgggcgtagcagcaaagccgccgagtcttca
gccgcgtaccaagctctgtctccgaaacaaattgaacagagaatccgtgatttggaagcg
cagatgtataagcatgcccaaaaccttgagtttgaggaagcggcaagcttaagagacgat
attcaggcgctgcgcgatcagtttattgcgatgtcttag
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