Enterobacteriaceae bacterium bta3-1: F652_556
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Entry
F652_556 CDS
T09572
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ebb
Enterobacteriaceae bacterium bta3-1
Pathway
ebb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F652_556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebb03400
]
F652_556
Enzymes [BR:
ebb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
F652_556
DNA repair and recombination proteins [BR:
ebb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F652_556
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F652_556
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F652_556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJQ98546
LinkDB
All DBs
Position
complement(615438..616862)
Genome browser
AA seq
474 aa
AA seq
DB search
MSKAAPTFLIHDYETFGQHPALDRPAQFAGVRTDADFNIIEEPLVIYCRPADDYLPQPEA
VMITGITPQVALARGVSEAEFSRQINQMFSVPGTCIMGYNNIRFDDEVSRNIFYRNFYDP
YAYSWQNGNSRWDLLDVLRTCYALRPEGINWPENEEGLPSFKLEHLSKANGIEHENAHDA
MADVYATIALAKLVKQAQPKLFDYLFQLRNKHKVSALLDIANMKPLVHISGMFGALRGNT
SLVAPLAWHPENKNAVIMCDLAGDMSPLLDLDTDALRERLYTRRSELRSDQPPAPLKLVH
INKCPVLAPDQTLRPENAERLGLDRQRCMDNLQLLRNHPELRDKVVAVFAEAEPFKASDD
VDAQLYDGFFSDADRSAMQIIRETLPQNLPALDLTFSDKRVLPLLFRYRARNFPTTLTDD
EQRRWQLHRQAVLTPERVQAYIHQLEELYNRHEEEPEKLAQLKELFEYARQLVN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaaggccgcgccaactttcctcatccacgactacgaaacctttggtcaacatccc
gcgctagatcggccagcccaattcgcgggcgttcgtaccgatgctgatttcaacatcatc
gaagagccactggtcatttactgccgcccagcagatgactatctgccacagccagaagcc
gtgatgatcacaggtattactcctcaggtggctttagcacgaggcgtgagcgaagccgag
ttttctcgccaaatcaatcaaatgtttagcgtgcccggcacctgcatcatgggctacaac
aatattcgttttgatgatgaagtgagccgcaatatcttttatcgcaacttttacgatccc
tacgcctatagttggcaaaacggtaattcgcgctgggatttactcgatgtgctgcgtacc
tgctacgccttacgtcctgaagggattaactggccagaaaatgaagaaggtttgccaagc
ttcaagcttgaacacctgtctaaagccaacggcatcgaacacgaaaatgcgcatgatgcg
atggccgacgtgtacgccaccattgcactggctaagttagttaaacaagctcagccgaag
ctgtttgattacctgttccaactgagaaacaagcataaggtttctgcgctacttgatatc
gccaacatgaaacctttagtccatatttccggaatgtttggcgcgctgcgtggcaacaca
agcctagtcgcaccgctggcgtggcatcccgaaaacaaaaatgctgtgatcatgtgcgat
cttgccggtgatatgtcgccactgttggatctcgataccgatgctctgcgcgaacgcctt
tacacgcgccgcagcgaactgcgttcggatcaaccgcctgcaccgcttaaattagtccat
atcaacaagtgtccggttttggcgccagatcagacgctgcgccctgaaaacgcagaacgc
cttggcttagatcgccagcgttgtatggataacttgcagctgctgcgtaatcacccagaa
ctgcgtgataaagtcgttgccgttttcgccgaggccgagccttttaaagcgtcagatgac
gttgatgcgcagctttatgacggcttcttcagcgacgccgaccgaagcgccatgcagatt
atcagagagacgctgccacagaatcttcccgctctcgacctaacgtttagcgataaacgc
gttttgcctttgctgttccgctatcgcgctcgcaacttccccactacgcttacggatgat
gaacaacgccgctggcaacttcatcgccaagcggtgctaacgcctgagcgggtacaggcg
tatatccatcaacttgaagagttgtataaccgccatgaagaagagcccgaaaagcttgcc
caactcaaagagctctttgaatatgcgcgccagctagttaattaa
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