Enterobacteriaceae bacterium ENNIH2: C2U52_03115
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Entry
C2U52_03115 CDS
T05417
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ebc
Enterobacteriaceae bacterium ENNIH2
Brite
KEGG Orthology (KO) [BR:
ebc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebc03021
]
C2U52_03115
Transcription machinery [BR:
ebc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C2U52_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Helicase_C_2
CC_BshC
Motif
Other DBs
NCBI-ProteinID:
AUV05345
LinkDB
All DBs
Position
281979..284885
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPATGENRLYARSDSPVTRVMFNPGDT
VTSHEGWQLTVEDVKEENGLLAYTGTRLDTQETNVMLREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DADNPFETEQLVICSLDFVRRNKQRLEHLCDAEWDLMVVDEAHHLVWSEEGPSREYQAIE
QLAERVPGILLLTATPEQLGLESHFARLRLLDPNRFHDFAQFVDEQQNYRPVADAVALLL
AGKRLNDTELNTLSDLIGEQDIEPLLQAANSDRDDAEAARQELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
VERDRAAAWFSEEDSGAQVLLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDKVHTDLINYLASPENT
DGFDDLIKACREQHDALKAQLEQGRDRLLEIHSNGGEKALALAESIEEQDDDTGLINFAM
NLFDIVGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFEREVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPPTP
IRLLVDKNGTNLATQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHTILQKGEAQVEKAAQ
ALIDAAKREADEKLSAELSRLEALKAVNPNIRDDELSAIESNRLQVLESLSQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccctttacacttggtcaacgctggataagcgacacggaaagcgaactcggactgggt
acagtcgtagcgatggatgcgcgaaccgttactctgctttttcccgcgacgggagaaaat
cgtctgtatgcacgcagcgattcccccgttacacgcgtcatgtttaatcctggcgatacg
gtaaccagccacgaaggctggcagctgactgttgaagacgtaaaagaagaaaacggtctg
ctcgcctataccggtacgcgcctggatacgcaggaaaccaacgtcatgctgcgcgaggtc
tttctcgacagcaaactggtctttagcaaaccgcaagaccgcctgttcgccgggcaaatc
gaccgtatggaccgtttcgcgctgcgttatcgcgcgcgtaaatatcaaagtgaacagtac
cgtatgccgtggagcgggctgcgcggccagcgtaccagcctgatccctcatcagttgcat
atcgcccacgatgttggccgtcgccatgcgccacgtgtgctgctggcggacgaagttggc
ttaggtaaaaccattgaagccgggatgatcctccaccagcagttgttgtccggcgccgcg
gaacgtgtgctgatcatcgtgccggaaacgctgcaacaccagtggctggtcgaaatgctg
cgtcgcttcaacctgcgctttgcgctgtttgatgacgaacgctatgccgaagcgcagcac
gatgccgacaacccatttgaaacggaacaactggtgatttgctcactggacttcgtgcgc
cgtaataaacagcgcctggagcacctgtgtgacgccgaatgggatttaatggtggtggat
gaagctcatcacctggtgtggagcgaagagggtccaagccgcgaataccaggccattgaa
cagcttgctgagcgcgtgccgggcattttgctgcttaccgcgacaccggagcaactcggc
cttgagagccactttgcgcgcctgcgcttgttggatccaaaccgtttccacgatttcgct
cagttcgttgatgaacaacagaactatcgcccggttgctgatgcggttgccttgttactg
gcaggcaaacgcctgaatgataccgagctcaatacgcttagcgacctgattggcgaacag
gacatcgagccgctgctgcaggccgccaacagtgaccgtgacgacgctgaggcagcgcgt
caggagctgatttcgatgctaatggatcgccacggcaccagccgcgtactgttccgtaac
acccgtaacggcgtgaaaggcttcccgaaacgcgaactgcacaccatcaagctgccgcta
ccgacccagtatcaaacggcaattaaagtctccggcatcatgggcgcgcgtaaaagtgct
gaagaccgcgcccgcgatatgctctacccggaacagatctatcaggaattcgaaggcgac
agcggtacctggtggaacttcgatccgcgcgtcgaatggctgatgggctatctgaccagc
catcgttcacagaaggttctggtgatctgcgccaaagcggccaccgcgctgcaactggag
caggtcttgcgcgagcgtgaaggtatccgtgccgcagtgttccatgaaggcatgtcgata
gtagaacgtgaccgcgcggcggcctggtttagcgaagaagacagcggcgcgcaggtattg
ctgtgctctgaaatcggctccgaaggacgtaacttccagtttgccagccatctggtgatg
ttcgatctaccgttcaatccggatctgctcgaacagcgtatcggtcgtctggatcgtatc
ggccaggcgcatgacattcagatccacgtgccttatctggaaaaaacggcgcaatccgtg
ctggtgcgttggtaccacgaaggtctggacgcgttcgaacacacctgcccgacagggcgg
acgatttacgacaaggtccacaccgatctgattaattaccttgcatcgccggaaaatacc
gacggttttgatgacctcatcaaggcctgccgcgagcagcatgacgcgctgaaagcgcag
cttgagcaaggtcgggaccgtctgctggaaattcactccaacggcggtgaaaaagcgctg
gctctggcagaaagcattgaagagcaggacgatgataccgggcttatcaatttcgccatg
aacctgttcgatatcgtcggtatcaaccaggacgatcgcggcgagaacatgattgtgctg
acgccatccgaccatatgctggtaccggattttccgggcctgccggaagatggctgtact
atcacctttgagcgtgaggtggcactgtcccgcgaagatgcgcagtttattacctgggaa
catccgctgattcgcaacgggctggatctgatcctctctggcgataccggtagcagcacc
atttcattgttgaaaaataaggcgctgcctgtcggtacacttctgctggaactgatttat
gtcgttgaggcacaggcgccgaaacaactgcagcttaaccgcttcctgccgccgacgccg
attcgtctgctggtggataaaaacggcactaaccttgccacacaggtcgagttcgagagt
ttcaaccgtcagctcagcgcggttaaccgccacaccggcagtaagctggtgaacgccgta
cagcaggatgtacacaccattctgcaaaaaggtgaagcgcaggtcgaaaaagccgcgcag
gcattgatcgacgccgcgaagcgcgaagcggatgaaaaactgtcagcggagctgtcgcgc
ctcgaagccctcaaagccgttaacccgaatattcgtgatgacgagctgagcgctattgag
agcaaccgcctgcaggtgctggaaagcctttctcaggcaggctggcgtcttgacgcgctg
cgtcttatcgttgtgacgcatcagtaa
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