Enterobacteriaceae bacterium ENNIH2: C2U52_06760
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Entry
C2U52_06760 CDS
T05417
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ebc
Enterobacteriaceae bacterium ENNIH2
Pathway
ebc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ebc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C2U52_06760 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebc03021
]
C2U52_06760 (rpoC)
03400 DNA repair and recombination proteins [BR:
ebc03400
]
C2U52_06760 (rpoC)
Enzymes [BR:
ebc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C2U52_06760 (rpoC)
Transcription machinery [BR:
ebc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C2U52_06760 (rpoC)
DNA repair and recombination proteins [BR:
ebc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C2U52_06760 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
LPD39
Motif
Other DBs
NCBI-ProteinID:
AUV06008
LinkDB
All DBs
Position
complement(987987..992210)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKNAQGEFTSKTSLIDTTVGRAILWMIVPKGLPFSIVNQPLGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINREGKEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEHWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSSGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKI
VDGQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIENAGSSDFLEGEQVEYSRVKIANRDLEANGKIGATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGSDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaaaccagagcgtgacggccttttctgcgcccgt
attttcggaccagtaaaagactacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatctgtgagaagtgcggcgttgaagtgacccagactaaagtgcgccgtgag
cgtatgggccacatcgagctggcgtctccgactgctcacatctggttcctgaaatctctg
ccgtcccgtatcggtttgctgctggatatgccgctgcgtgatatcgagcgtgttctgtac
ttcgaatcctatgtggttatcgaaggcggtatgacgaacctggaacgtaaccagattctg
accgaagaacagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagctatccaggccctgctcaagagcatggatctggagcaagagtgcgagcag
cttcgtgaagagctgaacgaaactaactccgagaccaagcgtaagaagctgaccaagcgt
atcaaactgctggaagcgttcgtacagtctggcaacaagccggagtggatgatcctgacc
gttctgccggttctgccgccagatctgcgtccgctggttccgctggatggtggtcgtttc
gcaacgtccgatctgaacgatctgtatcgtcgcgttattaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggttgacgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgacatgatcaaaggtaaacagggtcgtttccgtcag
aacctgctcggtaaacgtgttgactactccggtcgttctgtaatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcgctggagctgttcaaaccgttc
atttacggcaagctggaactgcgtggcctcgccaccaccatcaaagccgcgaagaaaatg
gttgagcgcgaagaagctgtagtctgggatatcctggacgaagtgatccgcgaacacccg
gtactgttgaaccgtgcgccaactctgcaccgtctgggtatccaggcctttgaaccggta
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcatacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagcttgaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtctccggcgaacggcgaaccaatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagcagagcgtatttatcgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgagtatgaaaaaaatgcacag
ggcgaatttacgtctaaaaccagcctgatcgatacgaccgttggtcgtgcgatcctgtgg
atgatcgtgccgaaaggtctgccgttctctatcgtgaaccagcctctgggtaaaaaagcg
atctccaaaatgctgaacacctgttaccgcattttgggtctgaaaccgaccgttattttt
gctgaccagacgatgtacaccggctttgcttatgcagcgcgttcaggtgcatctgttggt
atcgatgacatggttatcccggagaagaaacacgagatcatctccgaggcggaagccgaa
gtggctgagatccaggagcagttccagtctggtctggttaccgcaggcgaacgctataac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaggcgatgatggacaac
ctgcagaccgaaacggttatcaaccgtgaaggtaaagaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctt
gctggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtctggcggataccgcactgaaaacagcgaactccggttatctgacgcgtcgtctg
gttgacgttgcgcaggatctggttgtgaccgaagacgattgtggcaccctcgaaggtatc
accatgaccccggttatcgagggtggtgatgttaaagagccactgcgcgatcgcgtactg
ggtcgtgtaacggcagaagatattctgaagccgggtacagcagacattctggttccacgc
aacacgctgctgcacgagcactggtgtgacctgctggaagcgaactctgttgactccgtc
aaagtgcgttccgttgtatcctgtgacaccgactttggtgtatgtgcgcactgctacggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaggccatcggcgttatcgcggcg
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatcaagctc
agcaatgcgaagtctgttgttaactcatcaggcaagctggttgtgacctctcgtaacacc
gagctgaaactgatcgacgaattcggtcgtaccaaagagagctataaagtgccttacggt
gctgttatggcgaaaggtgatggtgagcaggttgctggcggtgaaaccgtagcaaactgg
gatccgcacaccatgccggtaatcaccgaagtaagtggtttcatccgctttactgacatg
atcgacggccagaccattactcgtcagactgacgagctgaccggtctgtcttctctggtg
gttctggattctgctgaacgtactaccggtggtaaagatctgcgtccggcactgaaaatc
gttgatggtcagggtaacgacgttctgatccctggcaccgatatgcctgcgcagtacttc
ctgccaggtaaagcgattgttcagctggaagatggcgtacagatcagttctggtgacacc
ctggcgcgtattccgcaggaatccggcggtaccaaggacatcaccggtggtctgccgcgc
gttgcggacctgtttgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagc
ggtatcatttccttcggtaaagaaaccaaagggaaacgtcgtctggttatcaccccggta
gacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgtttgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgacggtccggaagcgccgcacgacatt
ctgcgtcttcgtggtgttcacgcggttacgcgttacatcaccaacgaagtacaggacgtt
taccgtctgcaaggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatg
ctgcgtaaagcgaccatcgaaaatgcaggtagctccgacttcctggaaggcgagcaggtt
gaatactcccgcgtcaagattgcgaaccgcgatctggaagcgaacggcaaaatcggtgcg
accttctcgcgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tctgcggcatcgttccaggagaccacgcgtgtcctgaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgtggcctgaaagagaacgttatcgtgggtcgtctgatcccggcaggt
accggttacgcgtaccaccaggatcgtatgcgccgtcgcgcagcgggtgaactcccggct
gcaccgcaggtaactgctgaagatgcgtctgccagcctggcagaactgctgaacgcaggt
ctgggcggttctgacaacgagtaa
DBGET
integrated database retrieval system
