Enterobacteriaceae bacterium ENNIH2: C2U52_07050
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Entry
C2U52_07050 CDS
T05417
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ebc
Enterobacteriaceae bacterium ENNIH2
Pathway
ebc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2U52_07050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebc03019
]
C2U52_07050
03400 DNA repair and recombination proteins [BR:
ebc03400
]
C2U52_07050
Enzymes [BR:
ebc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U52_07050
Messenger RNA biogenesis [BR:
ebc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2U52_07050
DNA repair and recombination proteins [BR:
ebc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2U52_07050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF6972
zf-CXXC
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AUV06054
LinkDB
All DBs
Position
complement(1047160..1048989)
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AA seq
609 aa
AA seq
DB search
MAQAEVLNLESTALEVLRETFGYQQFRPGQQHIIDTVLGGRDCLVVMPTGGGKSLCYQIP
ALILPGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLY
IAPERLMLDNFLEQLTHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQYLPSVPFMAL
TATADDTTRRDIERLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLLRYVHDQRGKSGI
IYCNSRAKVEDTAARLQSRGFSAAAYHAGLENAVRASVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYAPEDMAWLRRCLEEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEACGNCDICLDPPKQYDGLKDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRELGHDKLKVYGMGREKSHEHWVSVIRQLIHLG
LVTQNIAQHSSLQMTDAARPVLRGEVPLQLAVPRVVALKSRVMQKAAVGNYDRKLFAKLR
KLRKAIADENNVPPYVVFNDATLIEMAEQMPITPGEMLGVNGVGVRKLERFGQEFMALIR
AHVDGDDDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatctggaatcgacagccctggaagttttacgggaaacc
ttcggctaccagcagttccgtccgggtcagcaacatatcatcgataccgtgctcggcggc
cgcgactgtctggttgtcatgccgaccggtggtggcaaatctctctgctatcaaattccg
gcgctgattctgcctggcctgacggtggtggtatcgccgctgatctctctaatgaaagat
caggttgatcagttactggcgaacggcgttgctgcggcctgtctgaactcaacacaaagt
cgtgaacaacagcttgaggtgatggctggctgccgcaccggacaaatccgtctgctgtat
atcgcccctgagcggctgatgcttgataactttcttgagcaactgacgcactggaacccg
gtacttctggcggtggatgaagcgcactgtatctcccagtggggtcatgatttccgcccg
gaatatgccgcactgggccagcttcgtcagtatctgccgtctgtgccttttatggcattg
accgccacggcggatgacaccacccgtcgcgatattgaacgtcttctggggctgaacgac
ccgctgattcagatcagcagttttgaccgacccaatatccgctacatgctgatggagaaa
ttcaaaccgctcgatcagcttttacgctatgtacacgaccagcgtggtaagtccggaatt
atttactgcaacagccgggcgaaggtggaagacaccgccgctcgcctgcaaagccggggt
tttagcgccgcggcgtatcatgccgggctggaaaacgcggtgcgcgccagcgtgcaggag
aaattccagcgcgatgatctgcaaatcgtggtcgcgaccgtcgcattcggcatggggatt
aacaaacccaacgtgcgatttgtggttcacttcgacattccgcgtaatatcgagtcttac
tatcaggaaaccggccgtgccgggcgtgatggcctgcccgccgaggcgatgctgttctac
gcgccggaagacatggcctggctgcgccgttgccttgaagaaaaaccggccgggcaattg
caggatattgaacgtcataagctcaatgcgatgggggcctttgcggaagcgcaaacctgc
cgccgtctggtcttgctcaattactttggcgaagggcgtcaggaagcctgcggtaactgc
gatatctgccttgatccgccgaaacagtatgatggcctgaaggatgcgcaaattgcgctc
tcgaccattggtcgcgtcaatcagcgtttcgggatgggctatgtggttgaggtgatccgt
ggggcgaataaccaacgtatccgtgaactcggccacgataagcttaaggtctacggcatg
ggccgggaaaaaagccatgagcattgggtaagcgtgattcgccagcttattcatttgggg
ctggtcacgcagaacatcgcccagcattcatcgttacagatgacggatgccgcgcgtccg
gtgctgcgtggcgaggttccgttgcaactcgccgtgccgcgtgtggtcgcgctgaaatcc
cgggtgatgcagaaggcggcggtcggcaactatgatcgcaaactcttcgctaagctgcgc
aaattacgtaaagcgattgccgatgaaaacaacgtgccgccgtatgtggtcttcaacgac
gcaactctgattgaaatggccgaacagatgcccattacgccaggtgaaatgctcggggtt
aacggcgtaggcgtacgtaaacttgagcgctttggtcaggagtttatggcgctgattcgt
gcccatgtggatggcgatgatgacgagtag
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