Enterobacteriaceae bacterium ENNIH2: C2U52_23935
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Entry
C2U52_23935 CDS
T05417
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ebc
Enterobacteriaceae bacterium ENNIH2
Brite
KEGG Orthology (KO) [BR:
ebc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebc03016
]
C2U52_23935
Enzymes [BR:
ebc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2U52_23935
Transfer RNA biogenesis [BR:
ebc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U52_23935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
AUV09102
LinkDB
All DBs
Position
4462765..4464699
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AA seq
644 aa
AA seq
DB search
MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHTEKERESAEPEELVEPFLSRFVGRVQKKDDRLSIVPDHPLIKDVIPCRAERGVTH
DFKDGDWAVAEMRRHPLKGDRSFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPNGVAT
AMLDEGLERIDLTALDFVTIDSASTEDMDDALYVEETAEGKLQLTVAIADPTAWIAEGSK
LDNIAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLDAQGAIEDNIEF
FAATITSKAKLVYDEVSDWLENSGSCQPQNDAIAAQIRLLHRVCLARSQWRQTHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHLGFD
PANSEQLATLLKGHGMHVDAEEVLTLDGFCKLRRELDAQPSGFLDSRIRRFQSFAEISID
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETAERPQAEATVQMAERRRLNRM
AERDVGDWLYARFLQNKAGTETRFSAEIIDISRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQETGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctcgcgcagctaaaacagcaacttcattcccaaacaccc
cgtgcggaaggtgtcgttaaagccacggaaaaaggctttggtttcctcgaagtcgatgcg
caaaaaagctactttattccgccaccgcagatgaaaaaagtgatgcacggcgatcgaatt
atcgctgtgatccacaccgaaaaggaacgcgaatccgctgaacctgaagagctggttgag
ccgttcctgagccgttttgttggccgggtgcagaagaaagatgaccgtctttctatcgtt
cctgaccatccgttaattaaagatgttatcccctgccgcgctgaacgtggcgtgacgcac
gatttcaaagacggtgactgggcggttgctgaaatgcgccgtcatccgctcaaaggcgac
cgcagcttttatgctgagctgacgcaattcatcacctttggcgacgaccattttgtacca
tggtgggtcaccctggcgcgtcataatcttgaaaaagaagcaccaaatggcgtagcgacc
gccatgctggatgaaggccttgagcgtatcgatttgaccgcgctggattttgttaccatc
gacagtgccagcaccgaagatatggacgatgcgctgtatgttgaagagaccgccgaaggc
aaactgcaactgaccgttgcgattgccgacccaaccgcgtggatcgcagaaggcagcaag
ctggataacatcgccaaagtgcgtgcctttaccaactacctgccgggcttcaacattccg
atgctgccgcgtgaactgtctgatgacttgtgttcactgcgcgctaatgaagttcgcccg
gttctggcctgccgcatgacactggatgcgcaaggcgctatcgaagacaatatcgaattc
tttgccgcgactattacgtcaaaagccaaactggtttatgacgaggtctctgactggctg
gaaaacagtggtagctgtcagccacagaacgacgccatagccgcacaaattcgtctgctg
catcgcgtctgtctggcacgttctcagtggcgccagacacatgcgctggtgttcaaagac
cgtcctgactatcgcttcattcttggcgaaaaaggcgaagtgctggatatcgttgccgag
ccgcgtcgaatcgcaaaccgtatcgtggaagagtcaatgattgccgccaatatctgcgcg
gctcgcgtgctgcgagacaagctcggttttggcatttataacgtgcatttgggcttcgat
ccggcgaacagtgaacagcttgccacactactgaaaggccacggaatgcacgtggatgcg
gaagaagtgctgacgctggatggcttctgtaagctgcgtcgcgagctggacgcacagccg
tccggtttcctcgacagtcgcattcgccgcttccagtcctttgcggaaatcagcatcgat
ccaggtccacattttggtctgggtctcgaagcttacgccacctggacatcccctattcgt
aagtatggcgatatgatcaaccatcgcctgctgaaagcggtaatcaaaggtgaaaccgca
gaacgtccacaggccgaagctaccgtgcagatggctgagcgtcgtcgtcttaatcgcatg
gcggaacgcgatgttggtgactggctgtatgcccgtttcttgcagaataaagccggtacc
gaaacccgatttagtgccgagattatcgatatcagccgtggcggcatgcgtgttcgtctg
gtggataacggtgccattgcgtttatcccggcaccgttcctgcatgcagtacgcgatgaa
ttagtatgcagtcaggaaaccgggaccgtgcaaattaagggcgaaaccgtttataaagtg
actgacgttattgatgtcaccattgcggaagttcgtatggaaacccgtagtattatcgcg
cgcccagccgcctga
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