Enterobacteriaceae bacterium ENNIH2: C2U52_25830
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Entry
C2U52_25830 CDS
T05417
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ebc
Enterobacteriaceae bacterium ENNIH2
Brite
KEGG Orthology (KO) [BR:
ebc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebc03016
]
C2U52_25830
Enzymes [BR:
ebc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C2U52_25830
Transfer RNA biogenesis [BR:
ebc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U52_25830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUV09430
LinkDB
All DBs
Position
complement(4866518..4867645)
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AA seq
375 aa
AA seq
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MNYQMITTNEALAALCEAAAGTDAIALDTEFVRTRTYYPQLGLIQLYDGENVALIDPLTI
TDWAPFRDLITNTQVTKFLHAGSEDLEVFLNAFGAMPQPMIDTQILAAFSGRALSWGFAA
MVEQYTGVALDKSESRTDWLARPLTTRQCDYAAADVWYLLPIARKLLAETEEAGWLNAAL
DECRLMMQRRGEILAPEEAWRDISNAWQLRTRQLACLRLLADWRLRKARERDLAVNFVVR
EENLWAVARYMPGSMGELDSIGLSGSEIRFHGKTLLSLVAQAQALPEDALPEPLLNLVDM
PGYRKAFKAIKALVQDVSESKGLSAELIASRRQINQLLNWHWQLKPQTNLPELISGWRAE
LMAERLNALLTEYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccagatgatcacgacgaacgaggcgctggcagcgctgtgtgaagctgcggct
ggcaccgatgctattgcgcttgatactgaatttgtccgcacccgtacctattatccccag
cttggtttaatccagctttatgacggggagaatgtggcgttaatcgacccgttaaccatc
actgactgggcaccgttccgcgatctgattaccaatactcaggtaacaaaattcctccac
gccggtagtgaagacctcgaagtcttcctcaacgctttcggcgccatgccgcagccgatg
atcgatactcaaattcttgcggccttctccgggcgtgcgctctcctgggggtttgcggca
atggtggagcagtacaccggcgtggcgctggataaaagcgagtcgcgcactgactggctg
gcccgtccgttaacgacacgtcagtgcgattatgcggcggccgatgtctggtatctgctg
cctatcgcgcgaaaattgctggctgaaaccgaagaagcagggtggctcaatgccgcactg
gacgaatgtcgcctgatgatgcaacggcgtggcgaaattctggcgccggaagaggcatgg
cgtgacatcagcaacgcctggcagttacgtacccgccaactggcatgcctgcgtttgctg
gcggactggcgtctgcgtaaagcccgcgagcgtgacctggcggtcaatttcgttgttcgt
gaagagaatctgtgggccgtggcgcgttatatgccgggcagcatgggtgagctcgacagc
attggcctttccggtagcgaaatccgttttcacggtaaaacgctgctgtctctggttgca
caggcgcaggcactgccggaagacgcgctgccggagccgctgttgaacctggtggatatg
cccggctatcgcaaagcctttaaagctatcaaggcactggtgcaggacgttagcgaaagc
aaaggactgagcgcagaattaattgcttctcgtcggcaaattaatcagttacttaactgg
cactggcaattaaaaccgcagacaaatttaccggaattaatcagtggctggcgtgcggaa
ttgatggctgagcggctcaacgcattattaacggaatacccgcgttaa
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