Escherichia coli BL21-Gold(DE3)pLysS AG: ECBD_1796
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Entry
ECBD_1796 CDS
T00939
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
ebd
Escherichia coli BL21-Gold(DE3)pLysS AG
Pathway
ebd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ECBD_1796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebd03400
]
ECBD_1796
DNA repair and recombination proteins [BR:
ebd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ECBD_1796
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ACT28847
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All DBs
Position
complement(1909973..1910635)
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AA seq
220 aa
AA seq
DB search
MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAIAIHRITEAMVAD
KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKT
RKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR
GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcattatcgatacagaaacctgcggtttgcagggagggatcgttgagattgcc
tctgttgatgtcattgacggaaaaatcgtcaaccccatgagccacctggtgcgccccgat
cgtcctattagtccacaagcgattgcgattcatcgcatcaccgaagccatggtcgccgat
aaaccgtggattgaagatgtgatcccacactattacggcagtgaatggtatgtcgcgcac
aacgccagctttgaccgccgcgtactgcctgagatgcccggtgagtggatttgcaccatg
aaactggcccgtcgcttgtggccaggaatcaagtacagcaatatggcgttatataaaaca
cgcaagctcaatgtacagacgccgccgggcctgcatcatcaccgcgcgttgtatgactgt
tatatcaccgccgcgttgcttatcgatattatgaacacctccggctggacggcagaacag
atggccgatatcaccggacgtccgtcgttgatgacgaccttcacctttggcaaataccgt
ggcaaagcggtttccgacgttgccgaacgcgatccgggctatctgcgctggttatttaat
aacctggacagcatgagcccggagctgcgtttaacactgaaacattatctggaaaatact
taa
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