Escherichia coli BL21-Gold(DE3)pLysS AG: ECBD_3409
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Entry
ECBD_3409 CDS
T00939
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ebd
Escherichia coli BL21-Gold(DE3)pLysS AG
Pathway
ebd03030
DNA replication
ebd03430
Mismatch repair
ebd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECBD_3409
03430 Mismatch repair
ECBD_3409
03440 Homologous recombination
ECBD_3409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebd03032
]
ECBD_3409
03400 DNA repair and recombination proteins [BR:
ebd03400
]
ECBD_3409
Enzymes [BR:
ebd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECBD_3409
DNA replication proteins [BR:
ebd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECBD_3409
DNA repair and recombination proteins [BR:
ebd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECBD_3409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
ACT30409
LinkDB
All DBs
Position
complement(3542659..3543399)
Genome browser
AA seq
246 aa
AA seq
DB search
MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRL
VDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRD
IPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLA
MTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDDELAAHEARLDLVQKKGG
SCLWRA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctatgagcactgcaattacacgccagatcgttctcgataccgaaaccaccggt
atgaaccagattggtgcgcactatgaaggccacaagatcattgagattggtgccgttgaa
gtggtgaaccgtcgcctgacgggcaataacttccatgtttatctcaaacccgatcggctg
gtggatccggaagcctttggcgtacatggtattgccgatgaatttttgctcgataagccc
acgtttgccgaagtagccgatgagttcatggactatatccgcggcgcggagttggtgatc
cataacgcagcgttcgatatcggctttatggactacgagttttcgttgcttaagcgcgat
attccgaagaccaataccttctgtaaggtcaccgatagccttgcggtggcgaggaaaatg
tttcctggtaagcgcaacagcctcgatgcgttatgtgcccgctacgaaatagataacagt
aaacgaacgctacacggggcattactcgatgcccagatccttgcggaagtttatctggcg
atgaccggtggtcaaacgtcgatggcttttgcgatggaaggagagacacaacagcaacaa
ggtgaagcaacaattcagcgcattgtacgtcaggcaagtaagttacgcgttgtttttgcg
acagatgacgagcttgcagcacatgaagcccgtcttgatctggtgcagaagaagggcgga
agctgcctctggcgggcataa
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