Escherichia coli BL21(DE3): B21_00487
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Entry
B21_00487 CDS
T02096
Symbol
sfmD
Name
(GenBank) predicted outer membrane export usher protein
KO
K07354
outer membrane usher protein
Organism
ebe
Escherichia coli BL21(DE3)
Brite
KEGG Orthology (KO) [BR:
ebe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ebe02035
]
B21_00487 (sfmD)
Bacterial motility proteins [BR:
ebe02035
]
Pilus system
Fimbrial proteins
B21_00487 (sfmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
DUF4888
Motif
Other DBs
NCBI-ProteinID:
CAQ31004
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All DBs
Position
528778..531387
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AA seq
869 aa
AA seq
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MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERG
NHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFP
ELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPAL
LLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQR
AIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVHGIARTAAQLT
IRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREG
RFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLG
NWGAVSLDVTHARSQLADDSRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDV
AYRRMEGYEYDYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNISQSLNDFGSLYISGTHQK
YWNTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYT
RENALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANW
QAAYGTLGVGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIEN
QTGILTDWRGYAVMPYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTR
IGVRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANS
RCIAHYVLPKQSLQQAVTVISAVCTHPGS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacccactactacggatattccgcagaggtatacctggtgtctggccggaatt
tgttattcatctcttgccattttaccctcctttttaagctatgcggaaagttatttcaac
ccggcatttttattagagaatggcacatccgttgctgatttatcgcgctttgagagaggt
aatcatcaacctgcgggcgtgtatcgggtggatctctggcgtaatgatgagttcattggt
tcgcaggatatcgtatttgaatcgacaacagaaaatacaggtgataaatcaggtgggtta
atgccctgttttaaccaggtacttcttgaacgaattggccttaatagcagtgcatttccc
gagttagcccagcagcaaaacaataaatgcatcaatttactgaaagctgtacctgatgcc
acaattaactttgattttgcagcgatgcgcctgaacatcactattcctcagatagcgttg
ttgagtagcgctcacggttacattccgcctgaagagtgggatgaaggtattcctgcttta
ctcctgaattataatttcaccggtaacagaggtaatggtaacgatagctatttttttagt
gagctcagcgggattaatattggcccgtggcgtttacgcaacaatggttcctggaactat
tttcgcggaaatggatatcattcagaacagtggaataatattggcacctgggtacagcgc
gccattattccgctgaaaagtgaactggtaatgggagacggcaatacaggaagtgatatt
ttcgatggcgttggatttcgtggtgtacggctttattcttctgataatatgtatcctgat
agccagcaagggtttgccccaacggtacatgggattgcccgtacggcggcccagctaacg
attcggcaaaatggttttattatctatcaaagctatgtttcccccggcgcttttgaaatt
acagatttgcacccgacatcttcaaatggcgatctggacgtcaccatcgacgagcgcgat
ggcaatcagcagaattacacaattccgtattcaacagtgccaattttacaacgcgaaggg
cgtttcaaatttgatctgacggcgggcgattttcgtagcggtaatagtcagcaatcatca
cctttcttttttcagggcacggcactcggtggtttaccacaggaatttactgcctacggc
gggacgcaattatctgccaattacaccgcctttttgttagggctggggcgcaacctcggg
aactggggcgcagtgtcgctggatgtaacgcatgcgcgcagtcagttagccgacgacagt
cgtcatgagggggattccattcgcttcctctatgcgaaatcaatgaacaccttcggcacc
aattttcagttaatgggttaccgctattcgacacaaggtttttatacccttgatgatgtt
gcgtatcgtcgaatggaggggtacgaatatgattacgattacgacggtgagcatcgcgat
gaaccgataatcgtgaattaccacaatttacgctttagccgtaaagaccgtttgcagtta
aatatttcacaatcacttaatgactttggctcgctttatatctctggtacccatcaaaaa
tactggaatacttcggattcagatacgtggtatcaggtggggtataccagcagctgggtt
ggcatcagttattcgctctcattttcgtggaatgaatctgtagggatccccgataacgaa
cgtattgtcggacttaatgtttcagtgcctttcaatgttttgaccaaacgtcgctacacc
cgggaaaatgcgctcgaccgcgcttatgcctcctttaacgccaaccgtaacagcaacggg
caaaatagctggctggcaggtgtaggtgggaccttactggaaggccacaacctgagttat
cacgtaagccagggtgatacctcgaataatgggtacacgggcagcgccacggcaaactgg
caggccgcttacggtacgctgggggtcgggtataactacgaccgcgatcaacatgacgtt
aactggcagctgtctggcggtgtggtcgggcatgaaaatggcataacgctgagccagcct
ttaggggataccaatgttttgattaaagcacctggcgcaggcggtgtacgcattgaaaat
caaactggcattttaactgactggcgcggctatgcggtgatgccgtatgccacggtttat
cggtataaccgtatcgcgcttgataccaatacgatggggaattccatcgatgttgaaaaa
aatattagcagcgttgtgccgacgcaaggcgcgttggttcgtgccaattttgatacccgc
ataggcgtgcgggcgctcattaccgttacccagggcggaaaaccggtgccgtttggatca
ctggtacgggaaaacagtaccggaataaccagtatggtgggtgatgacgggcaagtttat
ttaagtggtgcgccattgtctggtgaattactggttcagtggggagacggcgcgaactca
cgctgcattgcgcactatgtattgccgaagcaaagcttacagcaagccgtcactgttatt
tcggcagtttgcacacatcctggctcataa
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