Escherichia coli BL21(DE3): B21_00641
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Entry
B21_00641 CDS
T02096
Symbol
speF
Name
(GenBank) ornithine decarboxylase, degradative
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ebe
Escherichia coli BL21(DE3)
Pathway
ebe00330
Arginine and proline metabolism
ebe00480
Glutathione metabolism
ebe01100
Metabolic pathways
ebe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ebe00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
B21_00641 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
B21_00641 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
B21_00641 (speF)
Enzymes [BR:
ebe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
B21_00641 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
ADAMTSL1
Motif
Other DBs
NCBI-ProteinID:
CAQ31158
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All DBs
Position
complement(678130..680328)
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AA seq
732 aa
AA seq
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MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVTCGKLDEIDATGYGIPV
FIATENQERVPAEYLPRISGVFENCESRREFYGRQLETAASHYETQLRPPFFRALVDYVN
QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRADLCNADVAMGDLLIHEGAPCIAQ
QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGF
SQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALDINAKMHEGVSGRNM
WMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHS
FEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLGENGVVPEKCDLNSIL
FLLTPAEDMAKLQQLVALLVRFEKLLESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMH
DLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPY
PPGVLCVVPGEIWGGAVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPR
DAQSTLLKGEKL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaattaaaaattgcggttagtgattcttgcccggactgttttaccacgcagcga
gaatgtatctacattaatgaaagtcgtaatatcgatgtggcggcaatagttttatcgctc
aacgatgttacatgcggaaaactcgatgaaatcgatgccacgggttatggcatcccggta
tttattgctactgaaaatcaagaacgtgtacccgcagagtatttgccccgtatttcgggt
gtctttgagaattgcgaatcgcgacgagaattttatggtcgccagttagaaaccgctgcc
agccattatgaaactcaactgcgcccacctttcttccgcgcactggtcgattatgtcaat
caaggtaacagcgcgtttgattgccctggtcatcagggcggcgaatttttccgtcgccat
ccggcagggaatcagtttgtggaatactttggtgaggcgctgttccgtgccgacttgtgc
aacgccgacgtagcgatgggcgatctgctgattcacgaaggcgcgccatgcattgcacag
caacatgcggcaaaagtgtttaatgccgataaaacctacttcgttttaaatggcacttca
tcttctaacaaagtggttttaaacgccctgctaacaccgggtgatctggtgctgtttgat
cgcaataaccacaaatctaaccaccacggagcgttgctacaggctggtgcaacaccggtt
tatctggaaacggcacgtaacccgtatggctttatcggtggcattgatgcgcactgtttt
gaagaaagttacctgcgtgagctgatcgcggaagtcgcaccgcagcgggcaaaagaggct
cgtcctttccgcctcgctgtgattcagttaggcacctacgacggtacgatttataacgcc
cgccaagtggtggataaaattggtcatctgtgtgactacatcctgtttgactcagcatgg
gtcggctatgaacagtttattccgatgatggcggactgttcgccgctgttgctggatctt
aatgagaacgatccgggtattctggttacgcaatctgtgcataaacaacaggctggtttt
tctcagacttcacaaattcataaaaaagacagccacatcaaagggcaacagcgttatgta
ccgcacaaacgcatgaacaacgcctttatgatgcacgcctccaccagcccgttctatccg
ctgtttgccgcactggatatcaacgccaaaatgcatgaaggtgtcagcggtcgtaatatg
tggatggattgtgtggtaaatggcattaatgcccgcaaactgatcctcgataactgtcag
catattcgtccgttcgtacctgaactggtggatggtaaaccctggcagtcgtatgaaaca
gcgcaaattgcggttgatctgcgcttcttccagtttgtaccaggggaacactggcattct
tttgaaggctatgcagagaatcaatactttgtcgatccatgcaaactgttgctgacaacc
ccaggtattgatgcacgtaacggcgaatatgaagcgttcggtgtacccgcgacgattctt
gctaacttcctgggcgaaaatggcgtagtgccggaaaaatgcgatcttaactccatcctc
ttcctgctgactccggcagaagatatggccaaacttcagcaacttgttgccctgctggta
cgcttcgaaaaactgcttgagtccgacgcgccattagcagaagtgctaccttccatctac
aaacagcatgaagagcgctacgccggttataccctgcgtcagttgtgtcaggaaatgcat
gatttgtatgcccgccacaacgtgaaacaactgcaaaaagagatgttccgtaaggagcac
ttcccacgcgtcagcatgaatccgcaagaagccaactacgcctatttacgcggtgaagtg
gaactggttcgtctgccggatgcagaaggccgtatcgctgccgaaggtgcgcttccttat
cctccgggtgtgctgtgtgttgttccgggtgaaatctggggtggtgctgttctgcgttac
ttcagcgctctggaagaagggatcaacctgctgccaggttttgcaccggagctgcagggt
gtctatatcgaagaacatgatggtcgtaagcaagtttggtgctatgtcatcaagcctcgt
gatgcgcaaagcaccctgttgaaaggggaaaaattatga
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