Escherichia coli BL21(DE3): B21_02792
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Entry
B21_02792 CDS
T02096
Symbol
yghJ
Name
(GenBank) yghJ
KO
K10939
accessory colonization factor AcfD
Organism
ebe
Escherichia coli BL21(DE3)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
CooC_C
Motif
Other DBs
NCBI-ProteinID:
CAQ33309
LinkDB
All DBs
Position
complement(2974791..2979344)
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AA seq
1517 aa
AA seq
DB search
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTP
EPTPDPEPTPEPTPDPEPEPEPEPVPTKTGYLTLGGSQRVTGATCNGETSDGFTFTPGED
VTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQELAASDNKKSNAVSLVTSSNSCP
ADTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVP
VTTPGTKPDLNASFVSANAEQFYQYQPSEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTG
ENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNN
TRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGEQVVNLPNEFIEQFKTGQSKEIDT
AICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTSYKSVSKFHVFHDSTNFYGST
GNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVTRD
TATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLSGDSDDMKH
FMQNVLRYLSDDKWTPDAKASMTVGTNLDTVYFKRHGQVTGNSAEFGFHPDFAGISVEHL
SSYGDLDPQEMPLLILNGFEYVTQVGGDPYAVPLRADTSKPKLSQQDVTDLIAYLNKGGS
VLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRERQRRADGIWVYE
RYPVVEGALPYTINSETGEVTWKYQIDNKPDKKPKLEVASWQEEVDGEQVTQYAFIDEAD
YKTPELLAAAKKRILDAFPGLEECKDSDYHYEVNCLEYRPGTGVPVTGGMYVPQYTQLSL
NADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNKIEY
RYENDKDDELGFKTFTEFLNCYANNAYSEGTQCSADLKKSLVDNNMIYGDGSSKAGMMNP
SYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSAEGEKVTESISLYSNPTKWFAGN
MQSTGLWAPAQKEVTIESTASVPVTVTVALADDLTGREKHEVALNRPPKVTKTYDLKAND
KVTFKVPYGGLIYIKGNSPKNESAEFTFTGVVKAPFYKDGEWKNALNSPAPLGELESDAF
VYTTPKKNLEASNFTGGVAEFANDLDTFASSMNDFYGRDGESGKHRMFTYKALTGHKHRF
ANDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLNVPGATEV
ANNVLALYMQDRYLGKMNRVADDITVAPEYLDESNGQAWARGGAGDRLLMYAQLKEWAEK
NFDIKKWYPEGSLPAFYSDREGMKGWNLFQLMHRKARGDDVGKTKFGERNYCAESNGNAA
DTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLKLPKPE
QGPETINKVTEHKMSAE
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatttaaatataagaaatcgcttttagcggctattttgagcgcaaccctg
ttagccggttgtgatggcggtggctccggatcttcctccgatacgccgcctgtagattct
ggaacagggtctttgccggaagtgaaacctgatccaacaccaaacccggagccgacgcct
gagccaacgccggacccagaacctacgccggaaccgacacctgatccagagccagaaccg
gagccagaacctgttcctacgaaaacgggttatctgaccctgggcggaagccagcgggta
actggtgctacctgtaatggtgaaaccagcgatggctttacatttacacctggtgaggac
gttacttgcgtggcgggtaacacgacaattgccaccttcaacactcagtcagaagctgcg
cgtagcctgcgtgcggttgaaaaagtgtcgtttagtcttgaggacgcgcaagaactggcg
gcttccgacaataagaaaagcaatgcggtttcgctggtaacgtccagtaacagctgtccg
gcggatacagaacaggtttgcctgacgttctcctcggtgatcgagagtaaacgtttcgac
tcgctgtataagcaaatcgatctggcaccggaagagttcaaaaagctggtcaatgaagag
gtggaaaacaatgctgcgaccgataaagcgccatccactcatacctcaccggtcgtgcct
gtcaccacgccgggaacaaaaccggatctgaacgcttccttcgtgtcggctaacgcggaa
cagttttatcagtatcaaccttcggaaatcattctctccgaaggccgactggtcgatagc
cagggatatggtgttgctggcgtcaactactacaccaattcaggccgtggcgtgacaggg
gaaaatggtgaattttcctttagctggggcgaaaccatctcctttggtatcgataccttt
gaactggggtcagtgcgcggcaataagtcgaccattgcattgactgaactgggtgatgaa
gttcgcggggcgaatattgatcagcttattcatcgctattcgacgaccgggcaaaataat
acccgtgttgtgccggacgatgtacgcaaggtctttgccgaatatcccaacgtgatcaac
gagattatcaatctctcgttatccaacggtgcgacgctggatgaaggtgagcaagttgtt
aatctgccaaacgaatttattgagcagtttaagacgggtcaatccaaagagatcgatacc
gcgatttgtgcgaaaaccgacggttgtaacgaggctcgctggttctcgctgacgacgcgc
aatgttaatgacggccagattcagggcgttatcaacaagctgtggggtgtggatacaagt
tacaaatctgtcagcaagttccatgtattccatgactccaccaacttctatggcagcacc
ggtaatgcgcgcggtcaggcggtggtgaatatctctaacgcggccttcccgattctgatg
gcgcgtaatgataaaaactactggctggccttcggcgagaaacgcgcctgggataaaaac
gagctggcgtacattacggaagcgccttctcttgttgagccggaaaacgttacgcgcgat
accgccacctttaacctgccgtttatttcgctggggcaagtcggtgagggcaaactgatg
gttatcggtaacccgcactacaacagcattttgcgttgtccgaacggttacagctggaac
gggggcgttaataaagacgggcagtgtacgctcagcggtgattcagatgacatgaagcac
ttcatgcagaacgtactgcgctatctgtccgacgataaatggactccggacgcgaaagcc
agcatgaccgtaggcaccaacctggatactgtctatttcaaacgtcatggtcaggttaca
ggaaacagtgctgagttcggcttccatccggattttgcgggtatctctgttgagcattta
agtagctatggcgatctcgacccacaggaaatgccgctgctgatccttaacggctttgaa
tatgtgactcaggtggggggcgatccctatgcagtgcctctgcgtgcagataccagcaaa
ccgaagctgagccagcaggatgtgaccgatctgatcgcctatctgaacaaaggcggttcg
gtgctgatcatggaaaacgtgatgagcaatcttaaggaagagagcgcgtctggctttgtg
cgtctgctggatgccgcgggtctgtcaatggcactgaacaagtcggtggtgaataacgat
ccgcagggttatccgaaccgcgagcgccagcgccgagcggatggcatttgggtttatgaa
cgttatccggttgtggaaggtgcgctgccgtacaccattaattctgagacaggcgaagtt
acctggaaatatcagattgataacaaacctgataagaaaccgaagctggaagttgccagt
tggcaagaagaggttgatggtgaacaagtaactcaatacgcgtttattgatgaagccgac
tacaaaacgcctgagttgctggctgcggcgaagaagagaattctggacgcgttccctggg
ctggaagagtgtaaggattctgactaccactacgaggtcaactgtctggaataccgtcct
ggcacgggggttccggttactggtggcatgtatgttccacagtatacgcaactaagcctt
aacgccgacacggcaaaagcgatggtgcaggctgcggatttaggcaccaatattcagcgt
ctttatcagcatgagctctacttccggaccaatggtcgcaaaggtgagcgtctgagcagc
gtcgatctggaacgtctgtaccagaacatgtcggtctggctgtggaataaaattgaatat
cgctatgaaaacgacaaggatgacgagctgggctttaaaacgttcactgagttcctgaac
tgctacgccaacaatgcctatagcgaaggcacgcagtgttctgcagatctgaaaaaatcg
cttgtcgataacaacatgatctacggtgacggtagcagcaaagcaggcatgatgaaccca
agctatccgctcaactatatggaaaaaccgctgacgcgcctgatgctgggtcgttcctgg
tgggatctgaacatcaaagttgatgtcgagaagtatccgggagcggtatcggcagaaggt
gagaaggttactgaaagcatcagcctgtactcgaacccgaccaaatggtttgcgggtaac
atgcagtctactggcctgtgggctccggctcagaaagaggtcaccattgagtctactgca
tcagttcctgtgactgtcaccgtggcgctggccgacgatctgaccggacgcgagaagcat
gaagtcgcgctgaaccgtccgccaaaagtgacgaaaacctatgatctgaaagccaatgat
aaggtgaccttcaaggtgccttacggtggtctgatttatatcaagggcaacagcccaaag
aatgagtcagccgaattcacctttactggtgtggtaaaagcgccgttctataaagacggc
gaatggaaaaacgctctgaactcccctgcgccgctgggcgagctggaatcagacgctttc
gtttataccacgccgaagaagaaccttgaggccagcaatttcactggtggtgtagcagaa
ttcgctaacgatctggatacctttgccagctcgatgaatgacttctacggtcgtgatggc
gaaagcggtaagcaccggatgtttacctataaagcattgacggggcataaacatcgtttc
gccaacgatgtgcagatctccatcggtgatgcgcactcgggttacccggtaatgaacagc
agcttctcgacgaacagcaccacgctgccgacgacgccgctgaacgactggctgatttgg
cacgaagtcggtcataacgctgcagaaacaccgctgaacgtaccgggtgcaactgaagtg
gcgaacaacgtgctggcgctgtacatgcaggatcgctatctcggtaagatgaaccgtgtc
gctgacgacattaccgtcgcgccggaatatctggacgagagcaacggtcaggcatgggcg
cgcggcggtgcgggtgaccgtctgctgatgtacgcacaactgaaggaatgggcagagaaa
aactttgatatcaagaaatggtatccagaaggctctctgccagcgttctacagcgatcgt
gaagggatgaaaggctggaacctgttccagttgatgcaccgtaaagcacgcggcgatgat
gttggtaaaaccaagtttggcgaaagaaattactgtgctgagtcaaacggtaacgctgcc
gacacgctgatgctgtgcgcctcctgggtcgcccagacggatctttcggagttctttaag
aaatggaatccaggtgcgaatgcttaccagctgccgggggcgagcgagatgagcttcgag
ggcggtgtgagccagtcggcttacaacacgctcgcgtcgctcaagctgccgaaaccggaa
caggggccggaaaccattaataaggttaccgagcataagatgtctgccgagtaa
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integrated database retrieval system
