Escherichia coli BL21(DE3): B21_03062
Help
Entry
B21_03062 CDS
T02096
Symbol
csrD
Name
(GenBank) regulator of CsrB and CsrC decay
KO
K18765
RNase E specificity factor CsrD
Organism
ebe
Escherichia coli BL21(DE3)
Brite
KEGG Orthology (KO) [BR:
ebe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebe03019
]
B21_03062 (csrD)
Messenger RNA biogenesis [BR:
ebe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B21_03062 (csrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GDPD
Motif
Other DBs
NCBI-ProteinID:
CAQ33579
UniProt:
A0A140N5F5
LinkDB
All DBs
Position
complement(3262542..3264482)
Genome browser
AA seq
646 aa
AA seq
DB search
MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV
LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR
LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER
GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN
QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT
EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL
AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG
VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV
YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagattaacgacgaaattttcggcctttgttacgctgctcaccgggttaacaattttt
gtgactttgctgggctgttcgctaagtttctacaacgccattcagtataagtttagtcat
cgcgttcaggcggtggcgacggcgattgatacccaccttgtgtcgaatgacttcagcgta
ttaaggccacaaattaccgaattaatgatgtcggcagatatcgttcgtgtagacctgctc
catggtgataaacaggtttataccctggccagaaatggtagttatcgtccagttggctcc
agcgatctgtttcgcgaactgagcgttccgttgataaagcatccggggatgtcgttgcgt
ctggtttatcaggatccgatgggcaactatttccattcgttgatgaccaccgcgccgctc
acgggggcgattggctttatcattgttatgctcttcctggcggtacgctggttacaacgg
caacttgccgggcaagaattgctggaaacccgggctactcgtatcttaaacggtgagcgt
ggctctaatgtgttgggaaccatctatgaatggccgcccagaaccagcagtgcgctggat
acgctgcttcgtgaaattcagaacgcacgcgaacaacacagccgtcttgatacgctgatc
cgctcttatgccgcccaggacgtgaaaaccggcctcaataaccgactctttttcgataat
cagttagcaacgttactggaagatcaggagaaagtaggtacccacgggatcgtgatgatg
attcgtctgccggatttcaatatgttgagcgatacctgggggcacagccaggttgaagaa
cagttcttcactctgacgaatctgctgtcgacatttatgatgcgctaccctggcgcactg
ctggcgcgttaccaccgcagtgattttgctgcgctgttaccgcaccggacgttaaaagag
gcagagagcatcgccggtcagttaatcaaagccgttgataccttgccgaacaataaaatg
ctcgatcgcgacgatatgatccacattggtatctgcgcctggcgtagtggtcaggatacc
gagcaggtaatggaacatgcagagtctgccacgcgtaatgcgggattgcagggcggcaat
agctgggctatttacgatgactcgttgcctgaaaaaggacgcggtaatgttcgctggcgt
acgcttatcgagcaaatgctcagtcgcggcggcccgcgcctttatcaaaaaccggcggtt
actcgcgaaggtcaggttcatcatcgcgaactcatgtgccgcatcttcgatggtaatgaa
gaggttagctcggcggagtatatgccgatggtcttgcagtttggcttatcggaagagtat
gaccgtctgcaaatcagccgtcttattccactattgcgttactggccagaggaaaatctg
gcgattcaggttaccgttgagtcgctgattcgcccgcgttttcagcgttggctgcgcgat
acgttaatgcaatgtgaaaaatcacaacgaaaacgcataattattgaacttgcagaggcc
gatgtaggtcaacatatcagtcgtttacaacctgttattcgtttagtgaatgctttaggg
gtacgggtagccgtcaaccaggctggtttgacgctggtaagtaccagttggatcaaagaa
cttaatgttgagttactcaagctccatccggggctggtcagaaacattgagaagcgaacg
gagaaccagctgctggttcaaagcctggtggaagcctgctccgggaccagcacccaggtt
tacgccaccggcgtgcgttcgcgaagcgagtggcagaccctgattcagcgcggtgttaca
ggcgggcaaggggattttttcgcgtcctcacagccacttgatactaacgtgaaaaaatat
tcacaaagatactcggtttaa
DBGET
integrated database retrieval system
