KEGG   Escherichia coli BL21(DE3): B21_03097
Entry
B21_03097         CDS       T02096                                 
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit, subunit of RNA polymerase, core enzyme, RNA polymerase sigma 70, RNA polymerase sigma 54, RNA polymerase sigma 32, RNA polymerase sigma 38, RNA polymerase sigma 28, RNA polymerase sigma 19 and RNA polymerase sigma 24
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ebe  Escherichia coli BL21(DE3)
Pathway
ebe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ebe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B21_03097 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ebe03021]
    B21_03097 (rpoA)
   03400 DNA repair and recombination proteins [BR:ebe03400]
    B21_03097 (rpoA)
Enzymes [BR:ebe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B21_03097 (rpoA)
Transcription machinery [BR:ebe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B21_03097 (rpoA)
DNA repair and recombination proteins [BR:ebe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B21_03097 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 HHH_XRCC3_RpoA
Other DBs
NCBI-ProteinID: CAQ33614
LinkDB
Position
complement(3301204..3302193)
AA seq 329 aa
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtgacagagtttctaaaaccgcgcctggttgatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgaacctttagagcgtggctttggccatactctgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgttcaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcagggcaaagatgaagttattctt
accttgaataaatctggcattggccctgtgactgcagccgatatcacccacgacggtgat
gtcgaaatcgtcaagccgcagcacgtgatctgccacctgaccgatgagaacgcgtctatt
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctacccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcatgctacagccctgtg
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattctggctgaacaactggaagctttcgttgacttacgtgatgtacgtcagcct
gaagtgaaagaagagaaaccagagttcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaagcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagctccttaaaacgcctaaccttggtaaaaaatctctt
actgagattaaagacgtgctggcttcccgtggactgtctctgggcatgcgcctggaaaac
tggccaccggcaagcatcgctgacgagtaa

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