KEGG   Escherichia coli BL21(DE3): B21_03225
Entry
B21_03225         CDS       T02096                                 
Symbol
rtcR
Name
(GenBank) RtcR transcriptional activator
  KO
K14414  transcriptional regulatory protein RtcR
Organism
ebe  Escherichia coli BL21(DE3)
Brite
KEGG Orthology (KO) [BR:ebe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ebe03000]
    B21_03225 (rtcR)
Transcription factors [BR:ebe03000]
 Prokaryotic type
  Other transcription factors
   Others
    B21_03225 (rtcR)
SSDB
Motif
Pfam: RtcR Sigma54_activat Sigma54_activ_2 AAA_5 AAA Mg_chelatase NACHT AAA_16 AAA_22 AAA_30 AAA_7 AAA_33 AAA_19 AAA_2 AAA_14 T2SSE ATPase_2 ResIII TsaE MCM NPHP3_N NB-ARC
Other DBs
NCBI-ProteinID: CAQ33742
LinkDB
Position
3418558..3420156
AA seq 532 aa
MRKTVAFGFVGTVLDYAGRGSQRWSKWLPTLCLCQQESLVIDRLELLHDARSRSLFETLK
RDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLIQSSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLD
FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG
AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG
LRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT
RMATFATSGRITLDVVEDEINRLRYNWQESRPSALTQLLGAEAENIDLFDRMQLEHVIAI
CRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEALQDQHSSS
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgcgtaaaacagtggcttttggctttgtcggtaccgtgctggattatgccgggcgcggc
agtcagcgctggtcgaaatggcttccgacactctgtttatgccagcaagaatcgttggtc
atcgatcgactggaattattgcatgacgcccgctcgcgctcgctatttgaaacgcttaaa
cgcgatatcgccagcgtttcgccagaaacagaagtggtgagcgttgagattgaactgcat
aacccgtgggatttcgaagaggtttacgcttgcctgcatgatttcgcccgtggttacgag
tttcagccagaaaaagaagactatttaattcacattaccaccggcacccacgtcgcgcag
atttgctggtttctgctggcggaagcgcgttacctgcccgcccggctgatacaatcttca
cctccgcgcaaaaaagaacagccgcgcggcgcaggtgaagtgacgattatcgatctcgat
ttaagccgttataacgccatcgccagccgctttgccgaggaacgccagcaaacgcttgat
tttcttaagtccggcattgccacgcgtaacccccacttcaaccgcatgattgagcagatc
gaaaaagtggcgatcaaatcccgcgcgccgattctgcttaacggtccaaccggcgcgggc
aagtcatttctggcgcgacgcatcttcgagttaaaacaggcgcggcatcagtttagcggc
gcgtttgtggaagtgaactgcgccaccctgcgcggcgataccgccatgtcgacgctgttt
ggtcatgtaaaaggcgcgtttaccggggcgcgggaatctcgtgaaggtttattacgcagc
gccaacggcggaatgttgtttcttgatgagattggcgaactgggcgcagacgaacaagca
atgctgctaaaagccattgaagagaaaaccttttacccgtttggcagcgatcgccaggtg
agcagtgattttcagcttatcgccggaacggtgcgcgatttgcgccagctggttgccgaa
ggcaaattccgcgaagatctgtacgcgcggatcaatctctggaccttcaccctgccgggg
ctacgccagcgccaggaagatattgaacctaacctggattatgaagtggagcgccacgcc
tcactcaccggcgacagcgtgcgttttaacaccgaagcgcggcgtgcctggctggccttt
gcaacatctcctcaggcgacatggcgcggtaactttcgcgagctttctgccagcgtcacg
cggatggcaacctttgccactagcggacgcatcactctggacgtggttgaagatgagata
aaccgtctgcgctataactggcaggagagccgtccctccgcgcttacgcaactgctgggc
gcagaggcagaaaacatcgatctcttcgaccgtatgcaactggaacacgttatcgctatc
tgccgccaggcaaagtcgctttctgctgccggacgacagctttttgatgtttcgcgccag
ggcaaagccagcgtcaatgacgcggatcggctacgcaaatacctggcgcgttttggtctg
acctgggaagcattgcaggatcagcacagctccagttga

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