Escherichia coli BL21(DE3): B21_03427
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Entry
B21_03427 CDS
T02096
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ebe
Escherichia coli BL21(DE3)
Pathway
ebe00541
Biosynthesis of various nucleotide sugars
ebe01100
Metabolic pathways
ebe01250
Biosynthesis of nucleotide sugars
Module
ebe_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ebe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
B21_03427 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ebe01005
]
B21_03427 (rfaD)
Enzymes [BR:
ebe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
B21_03427 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ebe01005
]
Core region
B21_03427 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
CAQ33944
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All DBs
Position
3661960..3662892
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaggccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctgaatatcgcagactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcatgctcttcc
accaccgagtgggatggcaagtatatgatggataacaactatcaatactccaaagagctg
ctgcactactgtctggagcgcgaaatcccgttcctgtatgcatcttccgcggccacctac
ggcggacgcacctccgactttattgaatcccgcgagtacgaaaaaccgttgaacgtctac
ggttactcaaaattcctgtttgatgaatatgttcgtcaaatcctgcctgaagcgaactcg
cagattgttggcttccgctatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacacccagcttaacaacggtgaatcaccgaagctg
tttgaaggtagcgagaacttcaaacgcgacttcgtctatgtgggcgacgtggcagatgta
aacctgtggttcctggaaaatggcgtttccggcatcttcaatctcggtactggtcgtgcg
gaatccttccaggctgtagctgatgctacgctggcttatcacaagaaaggacagatcgaa
tacattccgttcccggataaactgaaaggccgctatcaggcgttcactcaggcagatctg
acaaatctgcgcgcggcgggttacgacaaaccgttcaaaaccgttgctgaaggtgtaacg
gaatacatggcctggctgaatcgcgacgcataa
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