Escherichia coli BL21(DE3): B21_03610
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Entry
B21_03610 CDS
T02096
Symbol
rho
Name
(GenBank) transcription termination factor Rho monomer; polarity suppressor, subunit of transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ebe
Escherichia coli BL21(DE3)
Pathway
ebe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B21_03610 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebe03021
]
B21_03610 (rho)
03019 Messenger RNA biogenesis [BR:
ebe03019
]
B21_03610 (rho)
Transcription machinery [BR:
ebe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B21_03610 (rho)
Messenger RNA biogenesis [BR:
ebe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B21_03610 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
AAA_25
AAA
OB_RNB
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CAQ34127
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All DBs
Position
3856651..3857910
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AA seq
419 aa
AA seq
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MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSLSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaacctggctcgtatgcgtaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggtgatggcgtactggagatattgcaggat
ggatttggtttcctccgttccgcagacagctcctacctcgccggtcctgatgacatctac
gtttcccttagccaaatccgccgtttcaacctccgcactggtgataccatctctggtaag
attcgcccgccgaaagaaggtgaacgctattttgcgctgctgaaagttaacgaagttaac
ttcgacaaacctgaaaacgcccgcaacaaaatcctctttgagaacttaaccccgctgcac
gcaaactctcgtctgcgtatggaacgtggtaacggttctactgaagatttaactgctcgc
gtactggatctggcatcacctatcggtcgtggtcagcgtggtctgattgtggcaccgccg
aaagccggtaaaaccatgctgctgcagaacattgctcagagcattgcttacaaccacccg
gattgtgtgctgatggttctgctgatcgacgaacgtccggaagaagtaaccgagatgcag
cgtctggtaaaaggtgaagttgttgcttctacctttgacgaacccgcatctcgccacgtt
caggttgcggaaatggtgatcgagaaggccaaacgcctggttgagcacaagaaagacgtt
atcattctgctcgactccatcactcgtctggcgcgcgcttacaacaccgttgttccggcg
tcaggtaaagtgttgaccggtggtgtggatgccaacgccctgcatcgtccgaaacgcttc
tttggtgcggcgcgtaacgtggaagagggcggcagcctgaccattatcgcgacggcgctt
atcgataccggttctaaaatggacgaagttatctacgaagagtttaaaggtacaggcaac
atggaactgcacctctctcgtaagatcgctgaaaaacgcgtcttcccggctatcgactac
aaccgttctggtacccgtaaagaagagctgctcacgactcaggaagaactgcagaaaatg
tggatcctgcgcaaaatcattcacccgatgggcgaaatcgatgcaatggaattcctcatt
aataaactggcaatgaccaagaccaatgacgatttcttcgaaatgatgaaacgctcataa
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