Enterobacteriaceae bacterium FGI 57: D782_0901
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Entry
D782_0901 CDS
T02431
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ebf
Enterobacteriaceae bacterium FGI 57
Pathway
ebf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D782_0901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebf03400
]
D782_0901
Enzymes [BR:
ebf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D782_0901
DNA repair and recombination proteins [BR:
ebf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D782_0901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
bDLD3
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGB76944
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All DBs
Position
915972..919535
Genome browser
AA seq
1187 aa
AA seq
DB search
MTDTAESLDPLRLPLYGERLIEASAGTGKTFTIAALYLRLLLGLGESAAFPRLVNVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRYNPDEPETTVDPLYARLLDEIADKQQAAEVL
LLAERQMDDAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESQLRYQACADFWRRHCYP
LKREIAQVIFDTWKGPQDLLKSIDRYLQGEAPTIKRPPDDSETLASRHEKIVAQIDAVKR
QWLAAVSELNDVLENSGIDRRKFNRGNQGKWIDKVSAWASEETRGYQLPDALEKFSQAFL
VERTKAGGEVPTHPLFSAIEALLAAPLSLNDLVITQAMVEIRDAVAQEKRRRGELGFDDM
LSRLDAALQSESGDALAAAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGD
PKQAIYAFRGADIFTYMRARSDVAAHYTLDTNWRSAPGVVASINKLFTTVDNPFMFRNIP
FLPVKSAAKNQSLKFEINGETQPAMNVCLMPGQGVGAGDYQAFMARQCAAQIRDWLTGGQ
RGTALLWRGEKARPVQASDITVLVRNRQEASLIRDALNALAIPSVYLSNRDSVFETPEAQ
ELLWVLQAALSPERETTLRSALATAMFGLNAQDIERLNQDEDAWDALVEEFSQYRDIWQK
RGVMPMLRALMSARNIAENLLATHGGERRLTDILHLSELFQEAATQLESEHALVRWLNQQ
IAEPNTNASNQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRESF
SAVLDLQQGEESLELAEAERLAEDLRLLYVALTRAVWHCSLGMAPLTSRRSDKATETDIH
HSAPGRLLQKGEQLDAAGLEAALRALCDEHIALTIASEPDDTRWQALQPEVPELTARQVM
RRMVDDWRVTSYSGLQQRGHSMAQDLLPRLDIDAAGVGEAMEEEALTPHHFPRGASPGTF
LHSLFEDLDFTQPVGAEWMREKLLLNGFEEHWEPVLTRWISQVLATPLTPEGVALNQLDA
RQKQVEMEFYLPIEKPLDPMALDAVIRRYDLLSAGCPPLDFRQVRGMLKGFIDLVFRHNG
RYYLLDYKSNWLGANSDAYTQQAMAQAMQSHRYDLQYQLYTLALHRYLRHRMADYDYEQH
FGGVIYLFLRGVDGEPGQQGIFSTRPQRELVDAMDALFAGQTQEMAS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttgatcccctgcgcttgcccctgtatggcgagcgcctg
attgaagcctctgcgggcaccggaaaaaccttcaccatcgccgcactctatctgcggctc
ttattgggcctgggcgaaagcgccgctttcccccggctcgtcaacgtcgaagagctgctg
gtggtaaccttcaccgaagcggcgacggaagagctccgtgggcgtatccgtagcaacatt
cacgagctgcgtattgcttgtcttcgctacaaccccgatgaacccgaaaccaccgttgac
ccgctctacgcccgtttgctggatgaaatcgccgataaacagcaggcggcggaagtgctg
ctgctggccgagcggcagatggacgatgcggcggtctttaccattcacggcttctgccag
cgcatgctcagcctcaacgcctttgagtcaggcatgctgtttgaacagcagctcattgaa
gatgaatcccagcttcgctatcaggcctgtgccgatttctggcgacgtcactgctacccg
ttgaagcgcgaaatcgcccaggtgatttttgacacctggaaagggccgcaggatctcctg
aaatccattgaccgctatttgcagggcgaagcaccaaccatcaaacgcccaccggacgac
agcgagacgctggcgtcgcggcacgaaaaaatcgtcgcgcagatagatgcggttaaacgc
cagtggctggcggcggttagcgaactgaatgatgtgctggaaaactccggcatcgaccgg
cgcaaatttaatcgcggcaaccagggcaaatggattgataaggtcagcgcctgggcgagc
gaggaaacacgcggctatcagcttccggatgcgctggaaaagttttcgcaggccttttta
gtcgaacgcaccaaagcaggcggtgaggtgccgacgcatccgctgttcagcgccattgag
gccctgcttgccgcgccgctcagcctgaatgacctggtgatcactcaggcaatggtggaa
attcgtgatgcggtggcgcaggagaaacgccgtcgcggcgaactgggttttgacgacatg
cttagccgtctggacgccgcgctgcaaagcgaaagcggcgacgcgctggccgcggcgatt
cgccagcgtttcccggtagcgatgattgatgaattccaggataccgacccgcagcagtac
cgcattttccgccgtatctggcgacagcaaccggatacggcgctgctgctgattggcgac
ccgaagcaggccatttacgcgtttcgcggtgcggatatttttacctatatgcgcgcgcgc
agcgacgtggcggcgcactacacgctggacaccaactggcgttccgcgccgggtgtagtg
gcaagcatcaacaaacttttcaccacggttgataacccgttcatgttccgcaatatcccg
tttttgccggtaaaatccgccgccaaaaaccagtcgctgaaatttgaaattaatggcgaa
acgcaaccggcgatgaacgtctgcctgatgccagggcagggcgttggtgcgggcgattat
caggcctttatggcgcgtcagtgcgcggcgcaaattcgcgactggctgaccggtgggcag
cggggcacggcgctgctgtggcgcggcgaaaaagcgcgtccggtgcaggcctcagacatc
acggtgctggtgcgtaatcgccaggaagcctcgttgattcgcgatgcgctcaatgcgctg
gcgatcccttcggtttatctctccaaccgcgacagcgtatttgaaacgcccgaagcgcag
gagttgctgtgggtactgcaggcggcgttaagcccggagcgtgaaaccacgctgcgcagc
gcgctggcgacggcgatgtttggcctgaacgcgcaggatatcgagcgcctgaatcaggat
gaagatgcctgggatgcgctggtggaagagttcagccagtaccgcgacatctggcaaaag
cgcggcgtgatgccgatgctccgcgccctgatgagcgcgcgaaacatcgctgaaaacctg
ctggcgacccacggcggcgagcgccgtttaaccgacattctgcacttaagcgaactgttc
caggaagccgcgacacagcttgaaagtgagcacgcgctggtgcgctggttgaatcaacag
atcgccgagcccaacactaacgcctcgaatcaacagatgcgactggagagcgacaagcac
ctggtgcaaatcgtcaccatccacaaatcgaaaggcctggagtatccgctggtctggctg
ccgtttatcgcccgttttcgcaagcaggatcaggcgttttatcacgatcgcgaatccttt
tcggcggtgctggatctccagcagggtgaagagagcctggagctggcggaagcggaacgg
ctggcggaagatttacgcctgctctatgtggcgctaacccgcgccgtctggcactgtagc
cttggcatggcacccctaacttcacgtcgcagcgacaaagcgaccgaaaccgatatccac
cacagtgcgccgggccgcctgctgcaaaaaggcgagcagcttgacgccgccgggctggaa
gccgcactgcgcgcgctgtgtgatgaacatattgcgctgacgattgccagcgaacccgac
gacacccgctggcaggcgttacagccagaggtgcctgaactgacggcgcgccaggtgatg
cggcgcatggttgatgactggcgcgttaccagttattccggcctgcaacagcgcggccat
agcatggcgcaggatctgctgccgcgtctggatatcgacgccgcaggcgtaggggaggcg
atggaagaggaagcgctcacgccgcatcacttcccgcgcggcgcatcgccgggcactttc
ctgcacagcctgtttgaagatctcgattttacgcagccggttggtgccgaatggatgcgt
gaaaaactgttgttgaatggctttgaagagcactgggaaccggtgctgacgcgctggata
tcccaggtgctggcaacgccgctcacgccagaaggcgtggcgttaaatcaactggatgca
cggcaaaaacaggtggagatggagttctatcttcctatcgaaaagccgctcgacccgatg
gcgctggatgccgtgatacgtcgttatgacctgctttcggcgggctgtccgcctcttgat
ttccgtcaggtgcgcgggatgctgaagggctttatcgacctggtcttccgccacaacggg
cgctactacctgcttgactataaatcgaactggctgggcgcgaacagcgacgcatacacc
cagcaggcgatggcgcaggcgatgcagtcgcaccgctacgatttgcagtaccagctctat
acgctggcgctgcaccgctatttgcgccaccgcatggccgattatgactacgagcaacac
tttggcggtgtgatttacctgttcctgcgcggcgtggacggtgagccgggccagcagggg
atttttagcacccgcccccaacgggaactggttgatgcaatggacgccctgtttgccggg
cagacgcaggagatggcatcgtga
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