Enterobacteriaceae bacterium FGI 57: D782_1839
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Entry
D782_1839 CDS
T02431
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ebf
Enterobacteriaceae bacterium FGI 57
Brite
KEGG Orthology (KO) [BR:
ebf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebf03016
]
D782_1839
Enzymes [BR:
ebf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D782_1839
Transfer RNA biogenesis [BR:
ebf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D782_1839
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGB77833
UniProt:
L0M1R3
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All DBs
Position
1910874..1911989
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AA seq
371 aa
AA seq
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MITTNEALSTLCEAVAQVTSIALDTEFVRTRTYYPQLGLIQLFDGQQTSLIDPLGITDWS
PLQAILQDTRITKFLHAGSEDLEVFLNVFGSMPKPLIDTQILAAFCGRPMSWGFAAMVEE
YTGVKLDKSESRTDWLARPLTERQCIYAAADVWYLLPIAHKLMAETEQAGRLEAALDECR
LMQQRRQEVVDPAEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREENL
WSVARYMPGSMGELDSLGLSGSEIRFHGKTLLSLVAKAQALPDDALPEPLLNLMDMPGYR
KAFKEIKALVQEVGQESGVSAELLASRRQINQLLNWHWQLKTFASAPEMISGWRGELLSG
RLDALLAEYPR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaccaacgaagcgctcagcaccttgtgcgaagccgttgcgcaggttacttcc
atcgcgctggacaccgagtttgtccgcacccgtacctattatccgcagctgggactcatt
cagctgtttgatggtcagcaaacgtcgcttatcgatccgctcggcattaccgactggtct
ccgttgcaggcgattttgcaggacacccgcatcactaagttcctgcacgcgggtagcgaa
gacctggaagtgtttctgaatgtattcggttcaatgccaaaaccgctgattgatacccaa
attctggccgcattttgcggccgcccgatgtcctggggttttgcggcgatggtggaagag
tataccggcgtcaaactggacaaaagcgagtcgcgtaccgactggctggcgcgcccgttg
accgagcgtcaatgcatctatgcggcggcagacgtttggtatctgctgcctatcgcgcac
aagctgatggcggaaaccgagcaggcagggcgcttagaggccgcactggatgagtgccgt
ctcatgcaacagcgtcgtcaggaagtggttgacccggcggaagcctggcgcgacatcacc
aacgcctggcagctgcgtacgcgtcagctggcgtgcctgcaactgctggccgactggcgt
ctgcgcaaagcccgtgagcgcgatctggcggtgaattttgtggtgcgtgaagaaaatctg
tggagcgtggcacgctatatgcctggcagtatgggcgagctcgacagcctgggcctatcc
ggtagtgaaatccgcttccatggtaaaacgctgctgagcctggtggcgaaagcgcaggcg
ctaccggatgacgcactgccagagccgttgctaaatctgatggacatgccgggctatcgc
aaagcgtttaaagagattaaagcgctggtgcaggaagtggggcaggaatctggtgtaagt
gccgaactgctggcgtcgcgtcgccagattaaccagttgctgaactggcactggcagctg
aaaaccttcgccagcgcaccagagatgatctccggctggcgcggcgagctgctgagtggc
cgtcttgacgcgctgctcgccgagtatccgcgctaa
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