Enterobacteriaceae bacterium FGI 57: D782_2317
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Entry
D782_2317 CDS
T02431
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ebf
Enterobacteriaceae bacterium FGI 57
Brite
KEGG Orthology (KO) [BR:
ebf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebf03019
]
D782_2317
Enzymes [BR:
ebf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
D782_2317
Messenger RNA biogenesis [BR:
ebf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D782_2317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
nSTAND3
T2SSE
NACHT
ResIII
AAA_16
SLFN-g3_helicase
PhoH
ABC_tran
NTPase_1
AAA_23
TsaE
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
AGB78295
UniProt:
L0M6A9
LinkDB
All DBs
Position
complement(2404265..2408167)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKLTFATLNQQLDALTLRDKQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VLLREAARPDITYPDNLPVSQKKQDILEAVRDNQVVIVAGETGSGKTTQLPKICMELGRG
IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDSTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESAGDILIFMSGE
REIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
QTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRQCRTDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHVFFRDNLKLRSEIEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDNWWKKASRETPDLLNFEKSMLIKEGA
EKVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRATPLELPLLDSLERELRRMTGVTVDRDAW
QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKDTLKGKVQETLSAVADDGIEQSGLHIW
SFGNLPDHYEQKRGNYKVKAWPALVDERESVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFTKLHDK
VRAELNETVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKLAIDPHRDRAQMLKVESVQQAWQQWLNKLPPARRDDED
VQEIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQISA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaactcaccttcgcgacgctgaatcagcagctcgatgcattaacg
ctgcgcgataaacagcgctttgcccgtcgcctgcacggtgtgaagaaggttaaaaatcct
gatgcacaacaggccatttaccaggaaatggcgaaagagattgaacaggcagcaggtaaa
gtcctgctgcgcgaagccgcacgcccggacattacctatccggataacctgccggttagc
cagaagaaacaggatatacttgaggcggtgcgcgacaaccaggtggtgattgtcgccggg
gaaacgggttccggtaaaaccacccagttgccgaagatttgtatggagctggggcgcgga
atcaaagggctgattggccatacccagccgcgtcgtctggcggcgcgtaccgtggcgaac
cgtattgcggaagagctgaaaacggagccgggtggttgcatcggttataaagtgcgtttt
agcgatcacgtcagcgacagcactatggttaagctgatgaccgacggtattctgctggcg
gaaatccagcaggaccgcctgctgatgcagtacgacaccatcattatcgatgaagcgcac
gaacgcagcctgaatatcgactttttgctcggttacctgaaagagctgctgccgcgccgc
cccgatctcaaaattatcatcacttccgcgaccatcgacccggaacgcttctcgcgccac
tttaataatgcgccgattatcgaagtttcagggcgtacctacccggtggaagtgcgctat
cgcccgattgtcgaagaggcggatgacaccgaacgcgaccagttgcaggccatttttgac
gctgtggacgaactggggcgggaaagtgcgggcgacattttgatctttatgagcggtgag
cgtgaaattcgcgataccgccgatgcgctcagcaaacgggatctgcgccatacggagatc
ctgccgctgtacgcacgactctccaacagtgaacagaatcgcgtcttccagtcgcatagc
gggcgtcgcattgtcctggcgaccaacgtcgccgaaacctcgctgaccgtgccgggcata
aaatacgttattgacccgggtaccgcgcgtatcagccgctacagcttccgcactaaagtg
caacgactgccgattgagccggtgtcccaggcatccgcaaaccagcgtaaaggccgctgt
ggtcgtgtctcggaagggatctgtattcgactctattcggaagatgatttcctgtcgcgc
ccggaatttaccgatccggaaattctgcgtaccaacctggcatcggttattttacagatg
accgcgctggggctcggagatatcgccgccttcccgtttgtggaagcgccggataaacgc
aatattcaggatggcgtgcgtctgctcgaagagctgggcgccatcaccacggacgaacag
caaaccgcctataaactgacgccgctgggccgccagctgtcacagttgccggttgacccg
cgtctggcacgtatggtgctggaagcgcaaaaacacggttgcgtgcgcgaggcaatgata
attacctcggccttgtctattcaggacccgcgtgagcgcccgatggataaacagcaggct
tcggacgaaaaacatcgccgtttccacgacaaagaatctgacttcctcgcatttgtgaac
ctgtggaattacctcggcgagcagcaaaaagcgctgtcatcgaatgcgttccgccgccag
tgccgcacggatttcctcaactatctgcgcgtgcgtgaatggcaggatatttacacccag
ctgcgccaggtggtgaaagaactgggtattccggttaacagcgaaccagcggaatatcgc
gaaatccatatcgcgctgctcaccggcctgctttcccatatcggcatgaaagacgccgat
aaacaggaatttaccggcgcacgcaatgcgcgcttttcgatattccccggttccggttta
ttcaaaaaaccgccgaaatggaccatggttgccgaactggtggaaacaagtcgcctgtgg
gggcgtatcgctgcgcgcatcgacccggaatgggtagagccggttgcccagcatctgatc
aaacgttcgtacagtgaaccgcactgggagcgggcacagggtgcggtgatggcgaccgag
aaagtgaccgtttacgggctgccgatcgttgccgcgcgtaaggttaactacagccagatt
gacccggcgctatgccgtgagctctttattcgccacgcgctggtggaaggtgactggcag
acgcgtcatgtattcttccgcgataacctgaaactgcgcagtgaaattgaagaacttgag
cacaaatcgcgccgtcgcgacattctggtcgatgacgaaacgctgtttgagttttacgac
cagcgcatcagccacgacgtgatctccgcccgacactttgataactggtggaaaaaggcc
agccgcgaaacgccggatttgctcaactttgaaaagagcatgctgattaaagagggggcg
gagaaagtcagcaagctggactacccgaacttctggcatcagggcaatctcaagctgcgc
ctgagctatcagtttgaacccggtgcggatgcggacggcgtgaccgtacatattccgctg
ccgttgctcaaccaggtggaagagagcgggttcgagtggcagatccctggcctgcggcgt
gaactgattatcgcactgataaaatcgctgccgaaaccggtgcgtcgtaactttgtgccc
gcaccaaattacgctgaagcgttcttaggtcgcgccacaccgctggagctgccgctgctc
gatagcctggagcgcgaactgcgccgtatgaccggggtcaccgttgaccgcgacgcctgg
cagtgggatcaggtccccgatcacctgaaaatcactttccgtgttgtggatgacaaaaac
aagaaacttcaggaagggcgttcccttcaggcgctgaaagacacgcttaaagggaaagtt
caggaaacgctttccgccgttgccgatgatggtatcgagcaaagcgggctgcatatctgg
agcttcggtaatttgccggatcactacgagcagaagcgtggcaactacaaagtgaaggcc
tggcctgcgctggtagatgagcgtgaaagcgtggcgattaagctttttgataacccgcag
gaacagcagcaggcaatgtggcgtggtttgcgccgcttactgctgctcaatattccgtcg
ccaattaagtatctgcacgagaaattgccgaacaaagccaaactggggctctactttaac
ccgtacggtaaagtgctggatctcattgatgactgcatctcctgtggtgttgataagctg
atcgatgaagcgggcggcccggtatggaccgaggaagggttcaccaagctgcatgataaa
gtgcgtgctgaactgaacgaaaccgtcgtcgaaatcgctaaacaggtcgagcagatactt
acagcggtgttcaatatcaacaagcgcctgaaagggcgtgttgatatgaccatggcgctg
gggctgtcggatattaaagcgcagatgggtgggctggtttatcgcgggtttgttactggc
aacggtttcaaacgcctgggcgatacgctgcgctatttgcaggcgattgagaaacgactg
gaaaaactggcaatcgacccgcaccgtgaccgcgcgcaaatgctgaaggtggaaagcgta
cagcaggcatggcagcagtggctgaataaactgccgcctgcgcgtcgggatgacgaggat
gttcaggaaatccgctggatgattgaagagctgcgcgtcagtttctttgctcaacagttg
gggacgccgtatcccatttccgataaacgcgtgttgcaggcgatggagcagattagcgcg
tag
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integrated database retrieval system
