Enterobacteriaceae bacterium FGI 57: D782_3070
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Entry
D782_3070 CDS
T02431
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ebf
Enterobacteriaceae bacterium FGI 57
Pathway
ebf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ebf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D782_3070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebf03400
]
D782_3070
DNA repair and recombination proteins [BR:
ebf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D782_3070
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D782_3070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
SBDS_domain_II
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGB79022
LinkDB
All DBs
Position
complement(3155593..3157614)
Genome browser
AA seq
673 aa
AA seq
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MSKPFKLHSAFQPSGDQPDAIARLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESEDLALRVELFDEEVERLSLFDPLTGHVEGTIQR
FTVYPKTHYVTPRERIVQAMEDIKDELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDEVIDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILALG
EGLAKTKTKGRGKSRGGVQIVEADQALTPKALQQQIQSLEAQMLQHAQNLEFEEAAEIRD
KLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaattgcattcggcctttcaaccctcaggcgatcagcctgatgcc
atcgcgcgcctgaaagaagggctggaagatggtcttgcgcatcaaacgctgttgggggta
accggctcggggaaaaccttcaccgtcgccaacgtgattgccgatctccagcgcccgacg
atggtgcttgcgccaaacaaaacgctggcggcgcagctgtatggcgagatgaaagagttt
ttccccgaaaacgccgtcgagttcttcgtctcctactacgattactatcagccggaagct
tacgttcccagttcagataccttcatcgagaaagatgcctcggtgaacgaacacattgaa
cagatgcgtttgtcggcgaccaaagccttgcttgagcgtcgcgacgtcatcgtggtggct
tccgtgtcggcaatttacgggttgggcgacccggatctctacctgaaaatgatgctgcat
ctgacggtcggcatgattatcgaccagcgcgccattctgcgtcgtctggccgagctgcaa
tacgcgcgcaacgatcaggcattccagcgcggtactttccgcgtacgcggcgaagttatc
gatatcttcccggcggaatcggaagacctggcgctgcgcgttgaactgtttgacgaagag
gtcgagcgcctgtcgctgtttgacccgctaacgggccacgtagagggcaccattcaacgt
tttacggtctatcccaaaacgcactacgtcaccccgcgtgagcgcatcgtgcaggcgatg
gaagatatcaaagacgaactggctgaacgtcgcaaagtgctgctggagaacaacaaactg
cttgaagagcagcggttaagccagcgcacgcagtttgacctcgaaatgatgaatgaactg
ggctactgctcgggcattgaaaactactcgcgctatctctcagggcgtgggccgggcgag
ccgccaccgacgttgtttgattaccttccggcggacggcctgctggtcattgatgaatcc
cacgtgaccattccgcaaattggcggcatgtatcgcggcgaccgggcgcgtaaagagacg
ctggtggagtacggtttccgtctgccgtcggcccttgataaccgtccgctgaagtttgaa
gaatttgaagccctcgcgccgcaaaccatttacgtttccgcgacgcctgggaactatgag
cttgagaaatccggcgacgaagttatcgatcaggtggtgcgtcctaccggcctgctcgat
ccggtgattgaagtgcgcccggtggcgacgcaggtcgacgatctgctgtcagagattcgt
ctgcgcacggccattaacgaacgcgtattggtcacgacgctgaccaagcgcatggcggaa
gatctcaccgaataccttgaagaacacggcgaacgcgtgcgctatttgcactcggacatc
gacaccgtcgaacgtatggaaatcattcgcgatttgcgccttggcgagtttgacgtgctg
gtggggattaacctgttgcgagaaggcctcgatatgccagaagtgtcgctggtagcgatt
ctggatgccgataaagagggcttcctgcgttccgagcgttcgctaatccagaccattggc
cgtgccgcgcgtaacattaacggtaaggcgattctctacggcgataaaatcacgccatcg
atggcgaaggcgattggtgaaaccgaacgtcgtcgtgagaagcagcagcgctacaacgaa
gagcacggaattgttccgcagggcctgaacaagaaagtggtcgatattctggcgctgggc
gaggggctggcgaaaacgaaaacgaaaggtcgcggtaagtctcgcggcggtgtgcagatt
gttgaagcggatcaggcgctgacgccgaaagcgttgcaacagcaaatccagtcgctggag
gcgcagatgttgcagcatgcgcagaacctggagtttgaagaagccgccgagatccgcgac
aagcttcatcagctacgtgaattgtttatcgcagcgtcataa
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integrated database retrieval system
