Enterobacteriaceae bacterium FGI 57: D782_3466
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Entry
D782_3466 CDS
T02431
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ebf
Enterobacteriaceae bacterium FGI 57
Brite
KEGG Orthology (KO) [BR:
ebf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebf03400
]
D782_3466
DNA repair and recombination proteins [BR:
ebf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D782_3466
Archaeal homologous recombinant proteins
D782_3466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_15
cobW
AAA_21
DUF3806
NTPase_1
AAA_14
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGB79395
UniProt:
L0M9G0
LinkDB
All DBs
Position
3570810..3573947
Genome browser
AA seq
1045 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVQGVAYRAFWSQNRARNQPDGNLQAPRVELARRD
NGKILADKVKDKLELIASLSGLDYGRFTRSMLLSQGQFAAFLNARPKERAELLEELTGTE
IYGRISAQVFEKHKQARTELEKLQAHSAGMVLLSEEQQQSLLGSLQALTLEEKVALEQQT
IAQHQQQWLLRQSELTRETHTAREALTAAEQALAAAQPQLETLRRAQPAELLRPRWAHLQ
EQAITLARTQQQTQQVNTRLHEATTRRNRIRATAVEQLRGLQQTQTQLNQWLEEHDRFKH
WGSELTGWRAAFALQARENTQLQNNQQRLSTLEKQLAQLPASTLTLNLAEATDAINAHNT
ARPLRQQLTTLHARFLPLQKRRQQLIEAQSNRRQQLEKLTAELTDRRQRYKEQNQQLSDV
RALCEMEATIVSLQAERARLQPGCACPLCGANEHPAIAEYQALTPGVNQARRDVLERDVK
RLAEEGATLRGQQDALQKQQQVEESELESLSQQEQVLTSQWQEVTAALGVTLRAEEAISE
WLAAQEEYEQQLYQHSQRLNLQQQVTDLQQQITQAQNELTQRREALQAQLATLSLTAPLA
GEENAWLAAREEENRLWQSQQTQHAETQHKLAQLQPLLDTLPACEIEETTPVSLEGWQQI
HNECISLASQWQTLSQQEALEKERLDQAEREFDQALAESQFSDRAAFQAALLEQLERERL
EQLKQSLESKLQQCRTLDTQAQDALQRHQAQRPATLSDDVSLEQVQTQLALMAQQLRENS
ARQGELRQQLKQDEENRRQQQNLLLEIENASAQVEDWAHLNALIGSKEGDKFRKFAQGLT
LDNLVWLANDQLSRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLAL
ALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKIIGVISHVEAMKER
IPVQIKVKKINGLGYSRLDKVFAVE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcctgaagaatcttaactcgctgaaaggcgagtggaaaatc
gatttcaccgccgaaccgtttgccagcaatggtctgtttgccatcaccgggccgacgggc
gcggggaaaaccaccctgctggacgccatctgtctcgcgctgtatcacgagacgccgcgc
ctcaacacagtatcgcaatcgcaaaacgatctgatgacccgcgacaccgccgagtgtctg
gcggaagttgagtttgaagtacagggcgtggcctatcgcgcattctggagccagaaccgc
gcacgtaatcagcctgacggcaacctacaggcaccgcgcgttgaactggcgcgtcgcgat
aacggcaaaattctggccgacaaagtcaaagacaagctcgaacttatcgcgtcgttgagc
gggctggattacggtcgctttacccgttcgatgttgctgtcgcaggggcagttcgccgcg
ttccttaatgcgcgccccaaagagcgcgcggagctgctggaggaactcaccggcacggaa
atttatgggcgaatttctgcacaagtatttgaaaaacataagcaggcgcggaccgagctg
gaaaagcttcaggcgcactccgcagggatggtgctgctaagtgaagaacagcaacagtca
ctgctgggaagtttgcaggcgcttactctcgaagagaaagtcgcgctggagcagcagacg
atcgcccaacatcagcaacagtggttgctgcgccagagtgaactgacgcgcgaaacgcac
accgcccgggaagcgctcaccgccgcagaacaggccctggcagccgcgcaaccccagctg
gaaacgctccgccgcgcccaaccggcggagctgctgcgcccgcgctgggcgcacctccag
gaacaggcaatcacacttgccaggacccagcagcaaacgcagcaagtaaatactcgctta
catgaagcaaccacgcgccgtaaccggattcgcgccacggcggtagaacagttacgcggg
ttgcagcaaacgcaaactcagcttaaccagtggcttgaggagcacgatcgtttcaaacac
tggggcagcgaactcaccggctggcgcgccgcatttgcgttacaggcgcgtgaaaacacg
cagttgcagaacaaccagcagcgcctgagtacgctggaaaaacagcttgcccagttaccg
gcctccacgctgacgctgaatctggccgaagccaccgacgccattaatgcacacaacacc
gcgcgcccgttgcgccagcagctcactacgctgcatgcacggtttctgccgctgcaaaaa
cggcgtcagcagttgatagaagcacagagcaaccgtcgccagcagctggaaaaactgacc
gctgagctgaccgatcgccgccagcgctacaaagagcaaaaccagcaactgagcgatgtt
cgcgcgctgtgcgagatggaagcaaccattgtcagtctgcaagccgaacgcgccaggctg
caacccggttgcgcctgcccgttgtgcggtgccaacgagcatccggcgattgcggaatac
caggcgttgacgccaggcgtgaatcaggcgcgtcgcgatgtactggagcgcgacgtcaaa
cggctggcggaagaaggtgcaaccctgcgcggccagcaggatgccctgcaaaaacaacag
caggttgaagaaagcgagctggagtctctttctcagcaggagcaagtacttacctctcaa
tggcaggaggtgacggccgcgttaggcgtgacgctacgcgccgaggaagcgattagcgag
tggcttgccgcacaggaagagtacgaacagcagctttatcagcacagtcagcggctgaat
ttgcaacagcaggtaaccgacctccagcagcagattacgcaggcacagaacgaactcacc
cagcgtcgcgaggcgttgcaggctcaactggcgacgctttcgctcaccgcaccgcttgcc
ggggaagagaacgcctggctggcggcgcgcgaagaggaaaatcggctctggcaaagccaa
cagacgcagcacgctgaaacgcagcataaactcgcccagcttcagccgttgctggacacg
ctgcctgcgtgtgaaattgaagagacaacgcctgtttcgctggagggatggcagcagatc
cacaacgaatgcatctcgctcgccagccagtggcaaaccttgtcacagcaggaagcgctg
gaaaaagagcgcctggatcaggccgagcgcgaattcgaccaggcactggcggaatcacag
ttcagcgaccgcgcagcgtttcaggccgcattgctggaacaacttgagcgcgagcgtctg
gagcaacttaaacagtcactggagagcaagcttcagcagtgccgcacgctggatactcag
gcacaggacgcactgcaacgtcatcaggcccaacgcccggcaacgcttagcgatgatgtc
tcacttgaacaggtgcaaacccagctggcgctgatggcccagcagttgcgggaaaacagc
gctcgtcagggtgaacttcgccagcagttgaaacaggatgaagagaaccgacgccagcaa
caaaacctgctgctggagattgaaaacgccagcgcgcaggtggaagactgggcgcacctg
aacgcgttgattggctccaaagagggcgataaattccgcaaattcgcccaggggctgacg
ctggataatctggtatggctggcgaatgaccagcttagccgcctgcacgggcgctatctg
ctgcaacgtaaagccagcgaagcgctggagctggaagtggtcgatacctggcaggcggat
gcggtacgcgatacacgaaccctctccggcggcgaaagtttcctcgtaagcctggcgctg
gcgctggcgctttctgacctggtaagccacaaaacgcgcatcgattcgctgttcctggac
gaaggctttggcacgctggacagcgaaaccctcgacacggcgctggacgcgctggatgcg
ctcaacgccagcggcaaaatcatcggcgtgataagccacgttgaggcgatgaaagagcgc
attccggtgcagataaaagtgaagaaaattaacgggctggggtatagcaggctggataag
gtgtttgcggtggagtga
DBGET
integrated database retrieval system
