Enterobacteriaceae bacterium FGI 57: D782_4285
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Entry
D782_4285 CDS
T02431
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ebf
Enterobacteriaceae bacterium FGI 57
Pathway
ebf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ebf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D782_4285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebf03021
]
D782_4285
03400 DNA repair and recombination proteins [BR:
ebf03400
]
D782_4285
Enzymes [BR:
ebf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D782_4285
Transcription machinery [BR:
ebf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D782_4285
DNA repair and recombination proteins [BR:
ebf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D782_4285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
EAD9
Motif
Other DBs
NCBI-ProteinID:
AGB80168
UniProt:
L0M8E7
LinkDB
All DBs
Position
complement(4484282..4488505)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFTIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGSVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGIQISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIENAGSSDFLEGEQVEYSRVKIANRELEANGKVAATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRIRRRAAGEVPA
TQQVSAEEASASLAELLNAGLGGSDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatttattaaagtttctgaaagcgcagactaaaaccgaagagtttgatgcgatc
aaaattgctctggcatcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaaacctgagcgtgacggccttttctgcgcccgt
atctttgggccggtaaaagactacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgtggtgtgatctgtgagaagtgcggcgttgaagtgacccagactaaagtacgccgtgag
cgtatgggccacatcgagctggcgtctccgactgcgcacatctggttcctgaaatctctg
ccgtcccgtatcggcctgctgctggatatgccgctgcgcgatatcgaacgtgttctgtac
ttcgaatcctatgtggttatcgaaggcggtatgacgaacctggaacgtaaccagattctg
accgaagaacagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagctattcaggccctgctgaaaagcatggatctggagcaagagtgtgaaact
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgt
atcaaactgctggaagcgttcgttcagtctggtaacaaaccagagtggatgatcctgacc
gttctgccggtactgccgccagatctgcgtccgctggttccgctggatggtggtcgtttc
gcgacttctgacctgaacgatctgtatcgtcgcgtcattaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcaccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggtcgacgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgacatgatcaaaggtaaacagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactactccggtcgttctgttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctcgccactaccatcaaagccgctaagaaaatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gttatgctgaaccgtgcaccaacactgcaccgtttgggtatccaggcgtttgaaccggtt
ctgatcgaaggtaaagcaattcagctgcacccgctggtttgtgcggcatacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtcccctgcgaacggcgagccaatcatc
gttccgtctcaggacgttgtattgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttatcgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcaccgaatacgaaaaagatgaaaac
ggcgagtttgttgctaaaaccagcctgaaagacacgaccgttggccgtgccattctgtgg
atgatcgtacctaaaggtctgccgttcaccatcgtgaaccaggctctgggtaagaaagcg
atctccaaaatgctgaacacctgctaccgtattctgggcctgaaaccgaccgttattttt
gcggaccagacgatgtacaccggctttgcttatgcagcgcgttcaggtgcatccgttggt
atcgatgacatggtcatcccggagaaaaaatacgaaatcatcagcgaagcggaagcggaa
gttgctgagattcaggaacagttccagtctggtctggtgaccgcgggcgaacgctacaac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgtgattaaccgtgacggtcaggaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgctgcacagattcgtcagctg
gcaggtatgcgtggtctgatggcgaagccagatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctcgacccacggtgctcgt
aaaggtctggcggataccgcactgaaaacagcgaactccggttacctgacccgtcgtctg
gttgacgtggcgcaggatctggtggttaccgaagacgattgtggcacgctggaaggcatc
accatgaccccggttatcgagggtggtgacgttaaagagccgctgcgcgatcgcgttctg
ggtcgtgtaactgcggaagacgttctgaagccgggtaccgcggacattctggttccacgc
aacacgctgctgcacgagcactggtgtgacctgctggaagagaactccgttgactccgtc
aaagttcgttccgtcgtatcctgtgacaccgactttggtgtatgtgcgcactgctatggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaagctatcggcgttatcgcggca
cagtccatcggtgaaccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatcaagctc
agcaatgcgaaatcggttgtgaactccagcggtaaactggttatcacttctcgtaatacc
gagctgaaactgatcgacgaattcggtcgtaccaaagaaagctataaagtaccttacggt
tctgttatggcgaaaggtgatggcgaacaggttgccggcggcgaaaccgttgcaaactgg
gatccgcacaccatgccggttatcaccgaagtaagcggttttgttcgcttcactgacatg
atcgacggccagaccattacgcgtcaaaccgacgaactgaccggtctgtcttctctggtg
gttctggattctgctgaacgtactaccggtggtaaagatctgcgtccggcgctgaaaatc
gttgatgctcagggtaacgacgttctgatccctggcaccgatatgcctgcgcagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcatccagatcagttctggtgacacc
ctggcgcgtgttccgcaggaatctggcggtaccaaggatattaccggtggtctgccgcgc
gtagcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagc
ggcatcatttccttcggtaaagaaaccaaagggaaacgtcgtctggttatcaccccggta
gacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgacggtccggaagcgccgcacgacatt
ctgcgtctgcgtggtgttcatgctgtgacgcgttacatcgttaacgaagtgcaggatgta
taccgtctgcagggcgttaagattaacgataaacacattgaagttatcgttcgtcagatg
ctgcgtaaagccaccatcgaaaacgcaggtagctccgacttcctggaaggcgaacaggtt
gaatactctcgcgtcaagatcgctaaccgcgaactggaagcgaacggtaaagttgcggcg
acattctcccgtgacctgctgggtatcaccaaagcgtctctggcaacagagtccttcatc
tctgccgcatcgttccaggagaccacgcgtgtcctgaccgaagcagccgttgcgggtaaa
cgcgacgaactgcgtggcctgaaagagaacgttatcgtaggtcgtctgatcccggccggt
accggttatgcgtaccaccaggatcgtattcgccgccgtgcagcaggtgaagtccctgct
actcagcaggtgagtgcggaagaagcgtctgccagcctggcagaactgctgaacgcaggc
ctgggcggttccgataacgagtaa
DBGET
integrated database retrieval system
