Enterobacteriaceae bacterium FGI 57: D782_4332
Help
Entry
D782_4332 CDS
T02431
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ebf
Enterobacteriaceae bacterium FGI 57
Pathway
ebf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D782_4332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebf03019
]
D782_4332
03400 DNA repair and recombination proteins [BR:
ebf03400
]
D782_4332
Enzymes [BR:
ebf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D782_4332
Messenger RNA biogenesis [BR:
ebf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D782_4332
DNA repair and recombination proteins [BR:
ebf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D782_4332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AGB80207
UniProt:
L0MA86
LinkDB
All DBs
Position
complement(4535464..4537293)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQENIIDTVLEGRDCLVVMPTGGGKSLCYQIP
ALVLNGLTVVVSPLISLMKDQVDQLIANGVAAACINSTQSREQQQEVMAGCRSGQIRLLY
IAPERLMLDNFLEHLAHWNPVMLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMAL
TATADDTTRRDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAGAYHAGLDNAVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLNDAQIAL
STIYRVNQRFGMGYVVEVIRGANNQRIREFGHDKLKVYGMGREKSHEHWVSVIRQLIHLG
FATQNIAQHSALQLTDAARPIVRGEIPLMLAVPRIVALKPRVMQKAAVGNYDRKLFSKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGTRKLERFGKEFMALIR
AHVDGDDDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtattgaatcaggaatcgctggctaaacaggttttgcaggaaacc
tttggctaccagcagttccgcccgggccaggaaaacatcattgataccgtgctggaaggg
cgcgattgcctggtggtgatgccgacaggcggtggcaagtcgctctgttatcaaattccg
gcgctggtgctaaatggcctgacggtggtggtatcgccgctgatctcgctgatgaaagac
caggtcgatcaattgatcgccaacggcgtggcggcggcctgcatcaactcaacgcagagc
cgcgagcagcagcaggaagtgatggcgggctgccgtagcgggcagattcgcctgctttac
atcgccccggaacgcctgatgctggataacttcctggagcatctcgcccactggaatccg
gtgatgctggcggttgatgaagcgcactgtatttcgcaatggggccacgatttccgcccg
gaatacgcggcattaggtcagttgcgtcagcgcttcccggcgctgccgtttatggcgctc
accgccacggctgacgacacgacacgccgcgacattgttcgcctgctggggctgaacgac
ccgcttattcaaatcagcagcttcgatcgtcccaacattcgctacatgctgatggagaag
ttcaagccgctcgatcaactgatgcgctatgtgcaggagcaacgcggcaagtccggcatt
atctactgtaacagccgggcgaaagtagaagacaccgccgcacgcctgcaaagccggggt
attagcgccggagcgtatcacgccgggctggataacgccgtgcgggccgatgtgcaggaa
aaattccagcgcgatgacctgcaaattgtggtcgccaccgtggcgttcgggatgggcatc
aacaagcctaacgtacgttttgtggtccacttcgacatcccgcgcaatatcgaatcctac
tatcaggaaacgggccgcgccgggcgtgatggcctgcctgcggaagcaatgctgttttac
gatccggcagatatggcctggctgcgccgttgcctggaagagaaacctgccgggccgtta
caggatatcgaacgtcataagctcaacgcgatgggggcatttgccgaagcgcaaacctgc
cgccgtctggtgttgctgaactactttggcgaagggcgtcaggagccatgtggtaactgc
gatatctgcctcgacccgcctaagcagtacgatgggttgaatgacgcacagatcgcgctc
tcgacgatttaccgggtgaatcaacgcttcgggatgggttacgtggttgaagtgattcgc
ggcgccaacaaccagcgtattcgcgagtttggccacgacaagctcaaggtctacggcatg
gggcgtgaaaagagccatgagcactgggtgagcgtgatccgccagttaattcatctgggc
tttgcgacgcagaacatcgcccagcactccgctctgcaattgactgacgccgcacgtccg
attgttcgtggagagattccgttgatgctggcggtgccgcgtattgtcgccctgaaaccg
cgcgtgatgcagaaagctgcagtgggtaactacgaccgtaaactgttttccaaactgcgc
aagctgcgtaaagccatcgccgatgaagagaacatcccgccttacgtggtcttcaacgat
gcgacgctgattgaaatggcggagcagatgccggtttctgccagcgaaatgctcagcgtt
aacggcgtggggacgcgtaaactggaacgctttggtaaagagtttatggcgctgatccgc
gcacatgtggatggcgacgatgatgagtag
DBGET
integrated database retrieval system
