Enterobacteriaceae bacterium FGI 57: D782_4370
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Entry
D782_4370 CDS
T02431
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ebf
Enterobacteriaceae bacterium FGI 57
Pathway
ebf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D782_4370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebf03021
]
D782_4370
03019 Messenger RNA biogenesis [BR:
ebf03019
]
D782_4370
Transcription machinery [BR:
ebf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
D782_4370
Messenger RNA biogenesis [BR:
ebf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D782_4370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AGB80240
LinkDB
All DBs
Position
complement(4573763..4575022)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaaccaggctcgtatgcgcaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggtgatggcgtactggagatattgcaggat
ggatttggtttcctccgctctgcagacagctcctacctcgccggtcctgatgacatctac
gtttcccccagccaaatccgccgtttcaacctccgcacaggtgataccatctctggtaag
attcgtcctccgaaagagggtgagcgttactttgcgctgttgaaagttaacgaagttaac
tacgataagccggaaaactcgcgcaacaagatcctgttcgagaacctgaccccgctgcac
gcaaactctcgtctgcgcatggaacgtggtaacgggtctaccgaagatttaaccgcacgt
gtgctggatctggcctcgccaattggccgtggtcagcgtggtctgattgtggcaccgccg
aaagccggtaaaaccatgctgctgcagaacatcgcgcagagcattgcctataaccaccca
gactgcgtactgatggtactgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagttgtcgcttctacctttgacgaaccggcatctcgccacgtt
caggttgcggaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagacgtg
atcatcctgctcgactccatcacccgtctggcgcgtgcctacaacaccgtcgtaccggct
tccggtaaagtgttgaccggtggtgtggacgccaacgccctgcatcgtccgaaacgcttc
ttcggtgccgcgcgtaacgtggaagagggcggcagcctgaccatcatcgccacggcgctg
atcgatactggttccaaaatggacgaagttatctacgaagagtttaaaggtacaggcaac
atggaactgcacctctctcgtaagattgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcattcacccgatgggcgaaatcgatgcgatggaattcctcatc
aataagctggcgatgaccaaaaccaacgacgacttcttcgacatgatgaaacgttcgtaa
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