Enterobacter bugandensis: FAI37_11260
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Entry
FAI37_11260 CDS
T05993
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ebg
Enterobacter bugandensis
Brite
KEGG Orthology (KO) [BR:
ebg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebg03009
]
FAI37_11260 (rlmD)
Enzymes [BR:
ebg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FAI37_11260 (rlmD)
Ribosome biogenesis [BR:
ebg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FAI37_11260 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
MTS
UPF0020
Cons_hypoth95
Methyltransf_11
Methyltransf_4
TRM5-TYW2_MTfase
Methyltransf_15
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_12
FtsJ
Methyltransf_23
CMAS
PrmA
Methyltransf_32
Ribosomal_L22
Motif
Other DBs
NCBI-ProteinID:
QCE27965
LinkDB
All DBs
Position
2319442..2320740
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AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVEATDLDPFGQGVARHNGKTLFITGLLPGERAEITLTEDKRQ
YARGQVKRRLNASPERVEPRCPHFGVCGGCQQQHASTELQQKSKSRALARLLKHEVDEII
ADEPWGYRRRARLSLSYQPKTERLEMGFRKAASSDIVDVKRCPILVPHLEALLPDVHRCL
ASLDGVRSLGHVELVLANNGPLMVLRHTVPLSKKDREKLERFSHSHELALFLAPQSEILE
QVSGEAPWYASDGLRLTFSPRDFIQVNDGINQQMVAKALEWLDVQPTDRVLDLFCGMGNF
TLPLARRAASVVGVEGVEALVVKGQENAEQNGLQNVTFFHQNLEEDVTQQPWAKQGFDKI
LLDPARAGAPGVMAHIIKLAPRRVVYVSCNPATLARDSEALNSAGYQIRRLAMLDMFPHT
GHLESMALFEHI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaagcgacgcgtgacgacgcgtcaaatcattactgttgaa
gccacggaccttgatccgtttggtcagggagtggctcgtcacaacggtaagactctgttt
ataacaggtttgctgccaggagaacgagcagaaattacgctgacggaagacaagcgtcag
tacgcgcgcggacaggtgaagcgtcgcctcaacgcgagcccggagcgcgtggagccccgc
tgtccacattttggcgtgtgcggaggctgccagcaacagcatgcgagcacagaattacag
caaaaaagtaaaagccgcgcgctggcgcgccttcttaaacacgaagttgacgagattatc
gccgatgagccctggggctatcgccgccgcgcgcgcctgagcctgagctatcagcccaaa
acggagcggctggagatgggttttcgcaaagcggcctccagcgatattgttgacgtgaag
cggtgccccattttggtgccccatcttgaggcgttacttccggacgtgcaccgctgtctt
gcatcgctcgacggggtgcgttcattgggccacgttgaactggtgctggcgaacaacggc
ccgctgatggtgctgcgccacaccgtgccgctgtcgaaaaaagatcgcgaaaaactggaa
cgcttttcgcattctcatgagcttgcgcttttcctcgcgcctcaaagcgagatacttgaa
caggtatcgggcgaagctccctggtatgcgtcagacgggctacgcttaacgttcagtccg
cgtgattttatccaggtcaacgacggcataaaccagcaaatggtggcgaaggccctggaa
tggcttgacgtacagcccactgaccgtgtgctcgatctgttctgcggcatgggtaacttt
accctgccgctggcgcgcagagcggcaagcgtggtcggggtggaaggcgttgaggcgctg
gtggtcaaaggccaggaaaacgcagagcagaacggcttgcaaaatgtgacattctttcat
caaaatcttgaggaagatgtcactcaacagccgtgggcaaagcagggtttcgacaaaatc
ctgctcgacccggcgcgtgcaggtgccccaggcgtcatggcgcatattattaaactcgcg
cccaggcgtgtggtctatgtttcctgtaacccggcaacgcttgcccgtgacagtgaggcg
ttaaacagcgcgggttaccagattcggcgtctggcaatgctggacatgttcccgcacact
ggacatctggaatcgatggcgttgttcgagcacatctaa
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